Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0287 |
Symbol | rpoH2 |
ID | 4684763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 272773 |
End bp | 273684 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639841481 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_988610 |
Protein GI | 121602451 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 79 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCATA TAAGTTTACC ATCAATCGCT GCAAATGATG GAGGTTTGAG TCGTTACTTG GAAGAGATAC GTCGTTTCCC AATACTTGAA CCAAAAGAAG AATATATGTT AGTGAAACGC TACAATGAGC ACAACGACCT GAAAGCTGCA CATAAGTTGG TAACCAGTCA TTTACGCCTC GTGGCAAAAA TTGCAATAGG ATATCGAGGT TATGGTTTAC CTATGGGGGA GGTTATTTCA GAAGGTAATA TTGGGCTGAT GCAAGCTGTT AAACGTTTTG AACCAGAGCG TGGATTTCGC CTTGCAACCT ATGCAATGTG GTGGATTAAA GCATCAATCC AGGAATATGT TTTACGGTCT TGGAGTTTAG TAAAAATCGG GACAACGACT AATCAAAAGC GCTTGTTCTT CAATCTGCGT AAACTAAAAA GTAAACTTCA AGCCTTAGAT AATGGTGAGC TTAATACAGA ACAAGTCAAA GAGATTGCAA CTCGATTAAA TGTCACAGAA GATGAAGTCG TGTCAATGAA TCATCGACTT AGTGGAGATA CTTCTCTCAA TGCTCCTCTT CGTACAAATG AAGATGAGCA TAGCGAATGG CAAGATTGTT TGGTTGATGA AGCAAGCAGC CAGGAACAAG TTTTAATTGA GAAAGACGAA TTAGAAAATC GGCGTTCCCT GTTAATACAC GCTATGGCTA ATCTTAATGA ACGTGAAAAA CGCATATTTG AAGCGCGTCG TTTGAGTGAT GAAGTGTTAA CTCTAGAAGA ACTCTCGAGT GAATTTAACA TCAGCCGTGA ACGTGTAAGA CAAATTGAAA TGCGCGCATT TGAAAAAGTG CAAGATTTTG TTAGAGCTTC CGCTTTATCT CAAAAACAAG CACAAATTCA GCATTGTTTG CACATTTCTT AA
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Protein sequence | MAHISLPSIA ANDGGLSRYL EEIRRFPILE PKEEYMLVKR YNEHNDLKAA HKLVTSHLRL VAKIAIGYRG YGLPMGEVIS EGNIGLMQAV KRFEPERGFR LATYAMWWIK ASIQEYVLRS WSLVKIGTTT NQKRLFFNLR KLKSKLQALD NGELNTEQVK EIATRLNVTE DEVVSMNHRL SGDTSLNAPL RTNEDEHSEW QDCLVDEASS QEQVLIEKDE LENRRSLLIH AMANLNEREK RIFEARRLSD EVLTLEELSS EFNISRERVR QIEMRAFEKV QDFVRASALS QKQAQIQHCL HIS
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