Gene BARBAKC583_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0287 
SymbolrpoH2 
ID4684763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp272773 
End bp273684 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content39% 
IMG OID639841481 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_988610 
Protein GI121602451 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCATA TAAGTTTACC ATCAATCGCT GCAAATGATG GAGGTTTGAG TCGTTACTTG 
GAAGAGATAC GTCGTTTCCC AATACTTGAA CCAAAAGAAG AATATATGTT AGTGAAACGC
TACAATGAGC ACAACGACCT GAAAGCTGCA CATAAGTTGG TAACCAGTCA TTTACGCCTC
GTGGCAAAAA TTGCAATAGG ATATCGAGGT TATGGTTTAC CTATGGGGGA GGTTATTTCA
GAAGGTAATA TTGGGCTGAT GCAAGCTGTT AAACGTTTTG AACCAGAGCG TGGATTTCGC
CTTGCAACCT ATGCAATGTG GTGGATTAAA GCATCAATCC AGGAATATGT TTTACGGTCT
TGGAGTTTAG TAAAAATCGG GACAACGACT AATCAAAAGC GCTTGTTCTT CAATCTGCGT
AAACTAAAAA GTAAACTTCA AGCCTTAGAT AATGGTGAGC TTAATACAGA ACAAGTCAAA
GAGATTGCAA CTCGATTAAA TGTCACAGAA GATGAAGTCG TGTCAATGAA TCATCGACTT
AGTGGAGATA CTTCTCTCAA TGCTCCTCTT CGTACAAATG AAGATGAGCA TAGCGAATGG
CAAGATTGTT TGGTTGATGA AGCAAGCAGC CAGGAACAAG TTTTAATTGA GAAAGACGAA
TTAGAAAATC GGCGTTCCCT GTTAATACAC GCTATGGCTA ATCTTAATGA ACGTGAAAAA
CGCATATTTG AAGCGCGTCG TTTGAGTGAT GAAGTGTTAA CTCTAGAAGA ACTCTCGAGT
GAATTTAACA TCAGCCGTGA ACGTGTAAGA CAAATTGAAA TGCGCGCATT TGAAAAAGTG
CAAGATTTTG TTAGAGCTTC CGCTTTATCT CAAAAACAAG CACAAATTCA GCATTGTTTG
CACATTTCTT AA
 
Protein sequence
MAHISLPSIA ANDGGLSRYL EEIRRFPILE PKEEYMLVKR YNEHNDLKAA HKLVTSHLRL 
VAKIAIGYRG YGLPMGEVIS EGNIGLMQAV KRFEPERGFR LATYAMWWIK ASIQEYVLRS
WSLVKIGTTT NQKRLFFNLR KLKSKLQALD NGELNTEQVK EIATRLNVTE DEVVSMNHRL
SGDTSLNAPL RTNEDEHSEW QDCLVDEASS QEQVLIEKDE LENRRSLLIH AMANLNEREK
RIFEARRLSD EVLTLEELSS EFNISRERVR QIEMRAFEKV QDFVRASALS QKQAQIQHCL
HIS