Gene BARBAKC583_0174 details

Gene Information

• Locus tag: BARBAKC583_0174
• Symbol: exbD
• ID: 4684463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 185469
• End bp: 185927
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639841374
• Product: TonB system transport protein ExbD
• Protein accession: YP_988512
• Protein GI: 121601835
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02803] TonB system transport protein ExbD, group 1

Plasmid Coverage information

• Num covering plasmid clones: 77
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATGA ATTTTCGAGA TGATTGGGAT AATGCAGAAG ATTTTGAGCT CAATAATACA 
ATCAATGTGA CGCCTTTCAT TGATGTTATT TTGGTGTTGC TCATTGTTTT TATGGTGGCA 
GCGCCTTTGG CTACATCGGT CATTCCTGTT CAACTGCCAT CTGTTACGCA AGAGCCTGTT 
TCACATCCTG ATGAACCACT TTACATTACT TTAAAAAAGG ATGAATCTTG GTATGTCGGC 
AATAAGCCTG TGAGTGAGGC TGATTTTATG GAGATCTTAT CTCAAGAGAC TGAGCAGAAT 
CTTGAAACGA AGATTTTAAT CAATGCTGAT GCTGAAATTG ATTATGGCTA TGTGGTGGGT 
GTGATTGATC GGGTCCGCAT GGCTGGCTAT ACCAAAATTG GCCTTGTCGG GCTGCAAAAA 
ACGGCCAATA AAACGGTTGA GACTATTCCT GCTGAATAA 

 

Protein sequence

MAMNFRDDWD NAEDFELNNT INVTPFIDVI LVLLIVFMVA APLATSVIPV QLPSVTQEPV 
SHPDEPLYIT LKKDESWYVG NKPVSEADFM EILSQETEQN LETKILINAD AEIDYGYVVG 
VIDRVRMAGY TKIGLVGLQK TANKTVETIP AE