Gene BARBAKC583_0088 details

Gene Information

• Locus tag: BARBAKC583_0088
• Symbol: sdhC
• ID: 4685100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 97559
• End bp: 97960
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639841288
• Product: succinate dehydrogenase, cytochrome b556 subunit
• Protein accession: YP_988426
• Protein GI: 121602258
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: 87
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAGA TAATCACGAT GAAGGATCGT CCTCGTTCTC CCCATGTAAC TATTTATCGT 
TGGTCTATCA CAATGGCGAT GTCGATTGCA CATCGTATAA CCGGCATAGC GATTTATTTT 
GGGATCTCTC TCCTTGCGAT TTGGCTTATG GCCATTGCTT GTGGGGAGAG TGCATTTAAA 
ACAGTTAATG AAATTTATGG GTCTTTTTTT GGGCTTTGTG TCTTATTTCT TTGCACATTT 
GCTGGGGTTC ATCACATGGT GGGCGATATT CGTCACCTTA TTGGAGAGTT GAAGCCTTGT 
CTTCTCGACA AAAAACAGGC CAACTTTATT GCTTGGGCAA ATATTTTTAT TTCCTTTAGT 
GCCACTGTCG TTATTTGGGT TATTGGGTAC AGTGTTGCTT AG 

 

Protein sequence

MTEIITMKDR PRSPHVTIYR WSITMAMSIA HRITGIAIYF GISLLAIWLM AIACGESAFK 
TVNEIYGSFF GLCVLFLCTF AGVHHMVGDI RHLIGELKPC LLDKKQANFI AWANIFISFS 
ATVVIWVIGY SVA