Gene BARBAKC583_0085 details

Gene Information

• Locus tag: BARBAKC583_0085
• Symbol: rimM
• ID: 4684403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 94994
• End bp: 95569
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639841285
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_988423
• Protein GI: 121602541
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 89
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATA ACAAAAAAGA ACTTAATAAA GCAGTTTTGC TTGCTGTTAT TAGAGCTGCA 
CATGGCATAA GGGGAGATGT TGTTGTTAAC TTATTGGGTG CTGAGCCGCA GCGTTTAAAG 
ACTTATGGGG TTCTTTATGA TGATAAAGGA CGACTTTATG AAATTGTATC CATGCGTGTT 
CACAAAAATA ACGTGATTGT GCGTTTTAAA GGGGTCGATG ATCGTAGTAC TGCGGAGGCT 
TTAAAGGGAG TTCAGCTTTA TATTGAGCGA GACCAGTTCG CCGATGATTT GGACACGGAT 
GAATTTTACC AAATAGATTT AATCGGGCTT CGTGTGTATG ATAATACTAA TCAGCTTCTT 
GGAGAAGTGA GTGGTTTTTT TAATTTTGGA GCAGGCGATC TGCTTGAAGT GCGTCTCATT 
TCTCACAAGA CCGAGCTTAT CCCGTTTAGT AAGGCGGCTG TGCCGGAAAT TTGCGTTGCT 
TCTGGTTTTC TTGTGGTAGA TCCGGTGGCA GCTGGTTTGT TCAGTGATCC TCATTCATTC 
AATGATTTGG CGTTAAATGA TCTGGAAAAA GGATAA 

 

Protein sequence

MEHNKKELNK AVLLAVIRAA HGIRGDVVVN LLGAEPQRLK TYGVLYDDKG RLYEIVSMRV 
HKNNVIVRFK GVDDRSTAEA LKGVQLYIER DQFADDLDTD EFYQIDLIGL RVYDNTNQLL 
GEVSGFFNFG AGDLLEVRLI SHKTELIPFS KAAVPEICVA SGFLVVDPVA AGLFSDPHSF 
NDLALNDLEK G