| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0079 |
|---|
| Symbol | cobT |
|---|
| ID | 4684273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 88851 |
|---|
| End bp | 90746 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639841279 |
|---|
| Product | cobaltochelatase, CobT subunit |
|---|
| Protein accession | YP_988417 |
|---|
| Protein GI | 121601803 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAA AAGCCAGCGA TAATAATAGC CAAAATCTGA AACATCACTT ACCCAACAGC
CCCCTTGATA GCGAAGCTTT TAAACTTGAT GCTGAAGCTT TTAAAAGAGC TACGTCCGCT
TGCATGCGCG CCATTGCTGG CACACCTACT CTTCAGACTA TTTTTGGTCA TTATAAGCCA
TCGATGAGTC ATACACATGC GCGTTTACCA GAGATCCCAC CCAAAGCAAC CCACAAAGAT
GTTGCGGTAA CCCGTGGGTT AAGTGATTCC ATGGGCTTAC GCAAAGCGTG GCATGACCCC
CATATTCACA TCCAGTTCAC CCCGCAAGAA CCCAAAGCAC GCGCTGTTTT TGACGCTCTT
GAGCAAACAC GTATCGAAGC TATTGGCACT TTGACTATGG AAGGGATGGC ACAAAATCTT
GAAATCATGC TCGCTGATAA ATATCAAAGA GCCCATTATC AAAGAATTAG TACACAAGAC
GAAGCGCCTA TAGAAGAAGC TATTGCTCTT TTATTGCGCG AAAAAATAAC AAAGCGTTCT
CCCCCAAAAG AAGCTGGCCC GGTCTTGGAC TTATGGCGCC ACGCTATCGA ACAACAGGCT
GCAGCTGAAC TCCAAGAACT CACGCATCAT CTTCATAACC AAAAGGCTTT TGCACGTGTT
GTCCGTCACA TGCTGTTTGC TTTAAAAATA TCCTCAGCAC TAGATGATGT GTCTGATGAT
ACTAATGTGA AAAAACAAAT AAAGGAGGGA GATACACACG CACAAATAGA CGAAGAATAT
AACGAGAAGG CAAAATACGC GCAAAGTGAG GAACAAAAAA CAACTGAACA AACAAATGAT
GTACAAGATG AAGGAAAAGC CCACGCCACT CAATCAAGCA CTGATGAAAG TATTGAACAA
GAGCAGACCA GTATTTGGCA GAAAAAACCG AGTGAACTCA AACATACTCT CCACACATCT
GAGTCTATGC AGAAACTTGC TGATTATAAA ATTTTTACGC AGCAATTTGA TGAAGTTTTG
GAAGCAACAG ATTTTTGTTC TGAGAGCGAA TTAAACCATT TGCGTCATCT TCTTGATCAG
CAACTTAATC ATCTTCAAAA TATTGTTGGA CGTTTAGCAA ACCGCCTTCA ACGACGCCTC
ATGGCACAAC AAAACCGTGC TTGGCATTTT GATCTTGAAG AAGGATATCT CGATACAGCA
AGACTGCCAC GCCTTATTAT TGACCCGATG TATCCCCTTT CTTTTAAAAA GGAATATGAG
ACACAGTTTC GTGATACCGT TGTTTCCTTA CTGATTGATA ATTCTGGATC CATGAGAGGA
AACCCCATCA CGGTTGCAGC AAGTTGTACG GATATTTTGG CGCAAACTCT TGAACGTTGC
GGTGTTAAAA TCGAAATTTT GGGCTTTACC ACCAAAGCCT GGAAAGGTGG ACAATCGCGC
GAAGAATGGG AAAAGCAAAA TAAACCTCCT CATCCAGGAC GTCTGAATGA TTTGCGCCAT
ATCATCTATA AAAGTGCTGA TACACCCTGG CGCCGTGCAC GACGCAATTT AGGTTTAATG
ATGCAGGAAG GTTTACTGAA AGAAAATATC GATGGTGAAG CTCTTATTTG GGCGCACCAA
CGCCTTCTCT CACGGCATGA ACATCGCCGT ATTCTGATGG TCATTTCTGA TGGGGCTCCC
GTTGATGATT CAACCTTGTC TGTTAATCCT GGCAATTACC TTGAAAAGCA TTTATGTGCT
GTTATTCAAG AAATTCAAAC ATATTCTCCT ATAGAACTCA CGGCTATTGG GATTGGTCAT
GATGTAACGC GTCATTATAA ACGCGCAATC ACCATTCCAA ATGCCGAAGA ACTCGCTAAT
GCCATCATTC AACAATTAGC AACACTTTTT GACTAG
|
|---|
| Protein sequence | MASKASDNNS QNLKHHLPNS PLDSEAFKLD AEAFKRATSA CMRAIAGTPT LQTIFGHYKP
SMSHTHARLP EIPPKATHKD VAVTRGLSDS MGLRKAWHDP HIHIQFTPQE PKARAVFDAL
EQTRIEAIGT LTMEGMAQNL EIMLADKYQR AHYQRISTQD EAPIEEAIAL LLREKITKRS
PPKEAGPVLD LWRHAIEQQA AAELQELTHH LHNQKAFARV VRHMLFALKI SSALDDVSDD
TNVKKQIKEG DTHAQIDEEY NEKAKYAQSE EQKTTEQTND VQDEGKAHAT QSSTDESIEQ
EQTSIWQKKP SELKHTLHTS ESMQKLADYK IFTQQFDEVL EATDFCSESE LNHLRHLLDQ
QLNHLQNIVG RLANRLQRRL MAQQNRAWHF DLEEGYLDTA RLPRLIIDPM YPLSFKKEYE
TQFRDTVVSL LIDNSGSMRG NPITVAASCT DILAQTLERC GVKIEILGFT TKAWKGGQSR
EEWEKQNKPP HPGRLNDLRH IIYKSADTPW RRARRNLGLM MQEGLLKENI DGEALIWAHQ
RLLSRHEHRR ILMVISDGAP VDDSTLSVNP GNYLEKHLCA VIQEIQTYSP IELTAIGIGH
DVTRHYKRAI TIPNAEELAN AIIQQLATLF D
|
|---|
| |