Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0056 |
Symbol | lysA |
ID | 4684111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 58710 |
End bp | 59984 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639841256 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_988394 |
Protein GI | 121602458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT TTTCTTATCA TCAGGGTGAG CTACACGCTG AAGGTCTCTC GCTTTCTACC CTCGCAAAGG ATGTGGGAAC ACCCTTTTAT TGTTATTCTT CTGGTGCATT GGTTGCACAT TTTAAAGAAT ATCAAGAGGC ATTCCACGAT ATGCCGAGTC TCATTGCTTA TGCGGTGAAG GCTAATTCCA ATCAAGCTGT TTTGCGGATT TTAGCCGCAA AGGGAGCAGG AGCTGATGTC GTGTCAGAGG GTGAATTGCG GCGTGCGCTT GCTGTTGGGA TTACACCTCA GCGCATTGTT TATTCTGGTG TCGGAAAAAC AGTGAGAGAG ATAGATTTCG CTCTTTCTCA AGATATTTTT TGTTTTAACG TTGAATCAGA ACCAGAACTT GAACAATTAT CAGCACGTGC TGTTGCTTTG TCAAAGACGG CGCGCATTTC ATTGCGCATT AATCCTGATG TAGATGCTAA GACCCATAAG AAAATTACAA CTGGCAGGTT TGATAATAAA TTTGGTATTC CGTTGTCATT AGCGTGTAGT GCCTATAAAA AAGCAGCGCA ATTGCCGGGT TTACAAGTCC GTGGGATGGA TATGCATATC GGCAGTCAGA TTTGTGATTT AAAACCGTTT GAAGACGCGT TTCTGATTGC TGCCGATTTT GTCCGTCATT TATGGCGTGA GGGCTATGCG ATCACCCATA TAGACATTGG GGGTGGGCTT GGCATTTCTT ATCATCCTGA ACAAAATATG GTTCCCTCTC CTGCTGATTA CGCGGCGTTG GTGAGGAAAC ATATTGCTCC TTTAGGGATT AATATTATTT TAGAACCTGG GCGCAGTATT GCTGGTCATG CTGGTGTGTT GGTAACATCT GTCATATATT TAAAAAGAGG AGAAGGGCGA AATTTTGTTG TTGTGGATGG CGCCATGAAT GATTTTCTTC GCCCAACACT TTATGATGCT TGGCAGACAG TCGTGCCCGT CAAAAAAGCA CCGGAAGATG CTCCCTTGAT CATGGCAGAT ATTGTCGGCC CAGTGTGTGA AACGGGTGAT TATTTAGGGT TAAATCGCTC ATTACCGATG GTTGCTGCCG GTGATCTTTT AGCGATTACA GGAGCAGGGG CTTATGGTGC AGTGATGGCA AGTACTTATA ATAGCCGACT GTTAGTGCCT GAAATTTTGG TGCAGAATAC GCGTTATGAT GTTATTCGGC CGCGTCTTGA TTATGAGCAA TTAATGGGAT TAGATCATAT TCCAGATTGG ATTGAGAATT TTTAA
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Protein sequence | MNFFSYHQGE LHAEGLSLST LAKDVGTPFY CYSSGALVAH FKEYQEAFHD MPSLIAYAVK ANSNQAVLRI LAAKGAGADV VSEGELRRAL AVGITPQRIV YSGVGKTVRE IDFALSQDIF CFNVESEPEL EQLSARAVAL SKTARISLRI NPDVDAKTHK KITTGRFDNK FGIPLSLACS AYKKAAQLPG LQVRGMDMHI GSQICDLKPF EDAFLIAADF VRHLWREGYA ITHIDIGGGL GISYHPEQNM VPSPADYAAL VRKHIAPLGI NIILEPGRSI AGHAGVLVTS VIYLKRGEGR NFVVVDGAMN DFLRPTLYDA WQTVVPVKKA PEDAPLIMAD IVGPVCETGD YLGLNRSLPM VAAGDLLAIT GAGAYGAVMA STYNSRLLVP EILVQNTRYD VIRPRLDYEQ LMGLDHIPDW IENF
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