Gene BARBAKC583_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0027 
SymbollpdA1 
ID4683877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp31210 
End bp32616 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content42% 
IMG OID639841227 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_988366 
Protein GI121601923 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATG ATGTTGTTAT AATTGGAGCT GGTCCGGGTG GTTATGTTGC AGCGATCAAA 
GCGGCACAAT TAGGTCTTAA AACTGCGATT ATTGAAAAAC GTGAGACATT GGGTGGTACA
TGTCTCAATG TTGGCTGTAT TCCCTCTAAG GCTTTGTTAC ATGCTTCGGA AGTGTTTGCT
GAAGCACAGC ATGGTTTTGA TACGCTTGGT GTTTCTGTTT CAAAACCTCA GCTTAATCTT
GAAAAGATGA TGGCGCATAA GAAATCTGTT GTTGCAGCCA ATACGAGCGG GATTTCTTTT
TTGATGAGAA AAAATAAAAT CGATGCTTTT TTTGGCACAG CAAAAATTTT AGGCGCAGGT
CAAGTTGCAA TCTTTGCCAA GGATGGTAAT CAGCAAACGA TTGTGACAAA GAATATTGTT
ATTGCTACAG GTTCAGATAT TTCAGGCATT CCAGGGGTTA ATGTTGAAAT TGATGAAAAG
GTTATTGTTT CTTCCACAGG GGCACTTGCA CTTGAAAAAG TTCCAACGCA CATGGTGGTT
ATTGGTGCTG GTGTTATTGG TTCAGAGCTT GGTTCTGTGT GGAGCCGCTT AGGGGCTAAA
GTAACCGTTA TTGAATTCCT GGATAAAGTT TTAGGATCAA TAGATGGTGA AGTTTCACGC
CATTTCCAGA AAATAATGGA AAAGCAGGGG ATTGAGTATA AGCTTGGTAC AAAAGTTACA
GCTGTTGCAA AATCTGGTTC GAGAGCTAAA ATTTCTTTTG AGGCTGTTAA AGGTGGTGCA
AGTGAAACTT TAGAGACTGA TGTTGTTTTG ATTGCAACGG GGCGTCGTCC TTATGTCGAC
GGTCTTGGTT TAGCAGAAGC AGGTGTTCAA TTAGATGAAC GCGGCTTTAT TGCAATAAAT
GAGCATTGGC AAACCAATAT TCCGGGAATT TACGCAATTG GTGATGTTGT TAAAGGACCA
ATGCTTGCTC ATAAAGCTGA AGAAGAAGGC GTTGCTGTGG CTGAGATTTT GGCAGGCCAA
AAGGGGCATG TTAATTTTGA TGTCATTCCC AGTGTTGTTT ATACACAGCC AGAGATCGCC
AGTGTGGGTA AGACAGAAGA AGAGCTGAAA GCTGCTGGCA TTGCCTATAA TGTTGGGAAA
TTTCCCTTCA TGGCTAATGG ACGTGCGCGT GCGATGCAAA AAGATGATGG GTTTGTTAAA
ATCCTTGCTG ATAAAAATAC AGATCGGGTT TTGGGTGGGC ATATTCTCGG ATTTGGTGCT
GGTGAGATGA TCCATGAAAT TGCAGTTCTC ATGGAGTTTG GTGGTTCATC AGAGGATTTG
AGTCGTTGTT GCCATGCACA TCCTACTTTA TCAGAAGCAG TGCGGGAAGC AGCTTTAGCA
ACATTTTTTA AACCACTTCA TATTTAA
 
Protein sequence
MSYDVVIIGA GPGGYVAAIK AAQLGLKTAI IEKRETLGGT CLNVGCIPSK ALLHASEVFA 
EAQHGFDTLG VSVSKPQLNL EKMMAHKKSV VAANTSGISF LMRKNKIDAF FGTAKILGAG
QVAIFAKDGN QQTIVTKNIV IATGSDISGI PGVNVEIDEK VIVSSTGALA LEKVPTHMVV
IGAGVIGSEL GSVWSRLGAK VTVIEFLDKV LGSIDGEVSR HFQKIMEKQG IEYKLGTKVT
AVAKSGSRAK ISFEAVKGGA SETLETDVVL IATGRRPYVD GLGLAEAGVQ LDERGFIAIN
EHWQTNIPGI YAIGDVVKGP MLAHKAEEEG VAVAEILAGQ KGHVNFDVIP SVVYTQPEIA
SVGKTEEELK AAGIAYNVGK FPFMANGRAR AMQKDDGFVK ILADKNTDRV LGGHILGFGA
GEMIHEIAVL MEFGGSSEDL SRCCHAHPTL SEAVREAALA TFFKPLHI