| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0010 |
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| Symbol | trmE |
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| ID | 4684249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | + |
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| Start bp | 10700 |
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| End bp | 12007 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639841210 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_988349 |
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| Protein GI | 121602914 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.00000341639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACAA TCTTTGCTGT TTCAAGTGGG TTATTGCCTT CAGGCGTCGC AGTCATAAGA
GTTTCTGGTC CTCGTGTTGT TGATATTGTA AAAACGCTTT GTGGTTGTTT GCCTAAAGCG
CGTTTTATGC ATCACGGGGA TCTTATTGCA CGTGATGGTA GTTTTTTGGA TTCCGCTTTA
ACTGTTTTTT TCCCCCGTCC TCATAGTTTT ACAGGAGAGG ATTGTGCAGA ATTTCATTTG
CATGGAGGAA AAGCCGTTGT TAATCGCTTT CTTGATGAAT TATCTACATT TACTGGATGT
CGTCTTGCAG AAGCAGGCGA ATTTTCACGT CGAGCATTTA TTGAGGGAAA AATAGATCTC
GTTCAAGCAG AAGGTCTTGC TGATTTAATA GAAGCAGAGA CAGAAAGCCA AAGACGTTTA
GCTGTTATGG GTGCAAATGG TCATCTGACA GAGCTTTATC GTCATTGGCG CAATAAACTT
ATGACAGCAC GCGCTTTGAT TGAAGCAGAG CTTGACTTTT CTGATGAGGC AGATGTTTCT
AATTTTTCCT CTGATAAAGT CTGGCAAAAT ATGCAGGAGC TCAGCGATTC ACTTTGTGAA
CATATAGCTG AAGGAGAACG CGCGAATATT TTACGTGATG GAATAAAAGT CGTTATTGTA
GGTGTTCCAA ATTCTGGAAA ATCAAGCATT ATCAACCGTC TTGCAGGAAG ACCTGTAGCT
ATTGTGACTG AAGAGGAAGG AACAACACGT GATGCTTTAG AGGTCAGATT AATTCTCGGT
GGCTTACCTG TTTTAGTAAT GGATACTGCT GGTTTTAGGG AAACAGAAAG CAAAATCGAA
CAATTAGGAA TAGATATTGC AAAGCAACAT GTTTTGGATG CTGATCTTGT GATTTTGGTT
GATGACATGA AAAATCCTCA AAAAATCTCT TTACCAAATA CATCAGCTGA AATATGGCGT
GTTGGTAATA AACTTGATAT TTGTGAAGGT GATAAAACGC GTTGGCCCAT ACAATTTTCA
GCATTGAATG GTTTAAATTT TGATTATTTT TTAAAAGAAA TAGAATCTTT TTGTTTGCAT
CGTATTGCTG AGATTGGAAA TATTTTTCCA GCACGAAAAA GGCAGATTCA GTTATTGAAA
GAGGCTGTTA AAGAAATTGA TTCTTCAATA AATTATACTT TTCTTGATTT AAGTTTACGT
GCAGAGCATC TTCGCCGTGC TAGTGATGCT CTTGGACGAA TTACAGGCGA TATTGATGTT
GAGGATTTGC TTGATATTAT TTTTTCACAA TTTTGTATTG GTAAATAA
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| Protein sequence | MDTIFAVSSG LLPSGVAVIR VSGPRVVDIV KTLCGCLPKA RFMHHGDLIA RDGSFLDSAL
TVFFPRPHSF TGEDCAEFHL HGGKAVVNRF LDELSTFTGC RLAEAGEFSR RAFIEGKIDL
VQAEGLADLI EAETESQRRL AVMGANGHLT ELYRHWRNKL MTARALIEAE LDFSDEADVS
NFSSDKVWQN MQELSDSLCE HIAEGERANI LRDGIKVVIV GVPNSGKSSI INRLAGRPVA
IVTEEEGTTR DALEVRLILG GLPVLVMDTA GFRETESKIE QLGIDIAKQH VLDADLVILV
DDMKNPQKIS LPNTSAEIWR VGNKLDICEG DKTRWPIQFS ALNGLNFDYF LKEIESFCLH
RIAEIGNIFP ARKRQIQLLK EAVKEIDSSI NYTFLDLSLR AEHLRRASDA LGRITGDIDV
EDLLDIIFSQ FCIGK
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