Gene BARBAKC583_0009 details

Gene Information

• Locus tag: BARBAKC583_0009
• Symbol: rho
• ID: 4685051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 9401
• End bp: 10666
• Gene Length: 1266 bp
• Protein Length: 421 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 639841209
• Product: transcription termination factor Rho
• Protein accession: YP_988348
• Protein GI: 121602564
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.000000017892
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAA TGAAACTACA AGAACTTAAA AGTAAAAGCC CTGTTGAGCT TATCTCTTTT 
GCCGAAACAC TGGAAGTTGA AAACGCTTCA CTGATGCGTA AACAAGAATT GATGTTCGCC 
ATCTTGAAAA AGCTCGCTTT GCAAGACGTA GAAATTATTG GGGAGGGCGT TGTTGAAGTT 
TTACAAGATG GATTTGGATT TTTACGATCT GCTGATGCTA ATTATCTTCC AGGGCCTGAT 
GATATTTATA TTTTACCCTC ACAAATTCAA TCTTTTTCTC TAAAAACAGG GGATACTGTT 
GAAGGCCCTA TACGCGGTCC GAAAGAGGGA GAACATTATT TTGCTCTCCT TAAAGTGAAT 
AAAATAAATT TTGAAGATCC TGAGAAAATT CGCTATAAAA TTCATTTTGA CAATCTTACA 
CCTCTTTATC CAAATGAGCC TTTCCGAATG GAAATTCAAG ATCCTACGGA AAAGGATATA 
TCATCACGAA TTGTTGATTT AATATCTCCA CTAGGAAAAG GTCAGCGAGG ATTGATTGTA 
GCTCCTCCTA GAACAGGAAA AACAGTTTTA TTACAAAATA TAGCTCATTC TATTACAACT 
AATCACCCTG AATGTTATCT TATTGTTCTT TTGATTGATG AACGTCCGGA AGAAGTTACA 
GATATGCAGC GTTCTGTAAA GGGAGAAGTG GTTTCTTCTA CCTTTGATGA ACCGGCAATA 
CGTCATGTAC GTGTAGCTGA AATGGTTATT GAAAAAGCTA AGCGTTTGGT TGAATATGGG 
CGTGATGTTG TTATTCTTCT TGATTCAATT ACCCGTCTTG GGCGAGCGTA CAACACCGTT 
GTTCCTTCAT CAGGAAAGGT TTTGACAGGT GGTGTTGATG CCAATGCTTT GCAACGTCCA 
AAGCGCTTTT TTGGTGCAGC ACGTAATATC GAAGAAGGTG GATCTTTAAC TATTATTGCG 
ACAGCCCTAA TTGATACGGG TAGTCGTATG GATGAAGTTA TTTTTGAAGA ATTTAAAGGA 
ACAGGGAATT CGGAAATTGT TCTTGATCGT AAGGTTTCTG ACAAACGTAT TTTCCCAGCT 
ATGGATGTTT TAAAGTCAGG AACGCGTAAA GAAGATCTTT TAGTAGCACG TCAAGATTTG 
CATAAAATTT TCGTACTTCG TCGTATTTTA GCTCCGATGA ATATAACAGA TGCAATGGAA 
TTTTTGATTG ATAAATTGAA ACATACAAAA AATAATAGTG AATTCTTTGA TTCAATGAAT 
ACTTAG 

 

Protein sequence

MQEMKLQELK SKSPVELISF AETLEVENAS LMRKQELMFA ILKKLALQDV EIIGEGVVEV 
LQDGFGFLRS ADANYLPGPD DIYILPSQIQ SFSLKTGDTV EGPIRGPKEG EHYFALLKVN 
KINFEDPEKI RYKIHFDNLT PLYPNEPFRM EIQDPTEKDI SSRIVDLISP LGKGQRGLIV 
APPRTGKTVL LQNIAHSITT NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAI 
RHVRVAEMVI EKAKRLVEYG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP 
KRFFGAARNI EEGGSLTIIA TALIDTGSRM DEVIFEEFKG TGNSEIVLDR KVSDKRIFPA 
MDVLKSGTRK EDLLVARQDL HKIFVLRRIL APMNITDAME FLIDKLKHTK NNSEFFDSMN 
T