Gene BARBAKC583_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0006 
SymbolaroE 
ID4684935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp6485 
End bp7360 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID639841206 
Productshikimate 5-dehydrogenase 
Protein accessionYP_988345 
Protein GI121602531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0000629471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATT TAGTAGATCA CAAGAAAATA TGTTCACGTG TTTTTGTTGT TGGTTATCCT 
ATTCATCATT CAAAATCACC AAAAATTCAT AAGTTTTGGC TTAAATACTA TGGTTTACAG
GGGGAATCTG TTTCAGAAGA AGTAACAGTC AGAGAATTTA GTAATTTTAT TGCATCAATA
AAAAAAGGGA ATTTTTTGGG AGGTAATGTT ACTTCACCAC ATAAACAAGA AGCTTTTCGT
TTAGCAGATT ATAAAGATGG AATAGCAACA GCTATTGGTG CTGCGAATAC ATTGTGGATT
GAAGGGAAAA AACTTCTTGC TACAAATAGT GATGCTTATG GTTTTAGTGC TAATCTTGAT
GATTTTGTTC CTGGTTGGGC TGGGGAAACG GCTCTTGTTT TCGGTGCTGG GGGTGCAGCG
CGTGCTATTA TCTACGCTTT AAAAAAACGA AAATTTGAGC GTATTTTTTT GTTCAATCGT
ACAAAAAAAA ATGCAGATGA TTTAGCTGAA TATTTCGGAA AATCTACTAT AAAAGTCTAT
GATTGGTGTA GCTCTTGTGA AAAAGCTCGT CAGGCAGATT TAATTGTGAA TACGACTTCT
ATGGATATGA TAAACTTTAG TGAAAGAGAA AACGGGGCTT TTTTTGATTT TCACAAAACA
AAACCAACAG CATTGGTAAC AGATGTTGTC TATACTCCGT TGATTACACC TTTTTTACAA
CAAGCAAAAG CCCATGGTTT AAAAACAGTC AACGGACTTG GTATGCTCTT ACACCAGGCT
GTTCCTGGCT TTGAAAAATG GTTTGGAGTG AGACCATCAG TAACAAAAGA ATTACGGGCA
GCAATTTTAG AAGATATGGG TGAAAATAGG GGATGA
 
Protein sequence
MVDLVDHKKI CSRVFVVGYP IHHSKSPKIH KFWLKYYGLQ GESVSEEVTV REFSNFIASI 
KKGNFLGGNV TSPHKQEAFR LADYKDGIAT AIGAANTLWI EGKKLLATNS DAYGFSANLD
DFVPGWAGET ALVFGAGGAA RAIIYALKKR KFERIFLFNR TKKNADDLAE YFGKSTIKVY
DWCSSCEKAR QADLIVNTTS MDMINFSERE NGAFFDFHKT KPTALVTDVV YTPLITPFLQ
QAKAHGLKTV NGLGMLLHQA VPGFEKWFGV RPSVTKELRA AILEDMGENR G