Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0004 |
Symbol | dnaQ |
ID | 4683943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 5177 |
End bp | 5881 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639841204 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_988343 |
Protein GI | 121602632 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.0166128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGAAA TTATTTTTGA TACTGAAACA ACAGGTTTAG ATAAAGATAA CGACCGTATT ATTGAAATCG GTTGTGTGGA AATGGTTGAT CGTTATCTTA CAGGACGCCA ATTCCATGTC TATTTGAATC CGCAAGGGGT TATTATTCCT GACGAGGTTG TCGCAATCCA CGGATTGACC AATGAGCGTT TAAAAGGTGA AAAAAAATTT GATGATATTG CTGATGAGCT TCTAGAATTT ATAGATGGCG CAATGATGAT TGCTCATAAT GCAAATTTTG ATATTAGCTT TCTTAATGCA GAATTAAAAC GGGTAAATAA GCCACTGATC AGCATTGATA ATGTCATCGA CACATTAGCT ATGGCGCGGC GAAAATTTCC TATGGGGCCT AATTCTCTTG ATGTTTTATG TAAACGTTTT GGGATTGATA ATAGTCACCG TATTCTTCAT GGTGCTCTTC TTGATGCAGA AATTCTTGCT GATGTCTATA TTGAATTAAT TGGGGGTAAA CAGGGAACAT TAGGATTTTA TAACAGTAAT GGTCGTCATT TAAACACTGA AAATGGCAGC AATATTTCTT ATGTCTTTAA AATTCGCCCA CAGGCCCTGC CTCCAAGGTT AAGTGAACAA GAAAAAAGCA TGCATGCTGA CCTGGTCAAC CAAATAGGCA AAAAAGCTTT ATGGAATCAG TTCAAGATCC CTTAA
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Protein sequence | MREIIFDTET TGLDKDNDRI IEIGCVEMVD RYLTGRQFHV YLNPQGVIIP DEVVAIHGLT NERLKGEKKF DDIADELLEF IDGAMMIAHN ANFDISFLNA ELKRVNKPLI SIDNVIDTLA MARRKFPMGP NSLDVLCKRF GIDNSHRILH GALLDAEILA DVYIELIGGK QGTLGFYNSN GRHLNTENGS NISYVFKIRP QALPPRLSEQ EKSMHADLVN QIGKKALWNQ FKIP
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