Gene BARBAKC583_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_0004 
SymboldnaQ 
ID4683943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp5177 
End bp5881 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content37% 
IMG OID639841204 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_988343 
Protein GI121602632 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.0166128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAA TTATTTTTGA TACTGAAACA ACAGGTTTAG ATAAAGATAA CGACCGTATT 
ATTGAAATCG GTTGTGTGGA AATGGTTGAT CGTTATCTTA CAGGACGCCA ATTCCATGTC
TATTTGAATC CGCAAGGGGT TATTATTCCT GACGAGGTTG TCGCAATCCA CGGATTGACC
AATGAGCGTT TAAAAGGTGA AAAAAAATTT GATGATATTG CTGATGAGCT TCTAGAATTT
ATAGATGGCG CAATGATGAT TGCTCATAAT GCAAATTTTG ATATTAGCTT TCTTAATGCA
GAATTAAAAC GGGTAAATAA GCCACTGATC AGCATTGATA ATGTCATCGA CACATTAGCT
ATGGCGCGGC GAAAATTTCC TATGGGGCCT AATTCTCTTG ATGTTTTATG TAAACGTTTT
GGGATTGATA ATAGTCACCG TATTCTTCAT GGTGCTCTTC TTGATGCAGA AATTCTTGCT
GATGTCTATA TTGAATTAAT TGGGGGTAAA CAGGGAACAT TAGGATTTTA TAACAGTAAT
GGTCGTCATT TAAACACTGA AAATGGCAGC AATATTTCTT ATGTCTTTAA AATTCGCCCA
CAGGCCCTGC CTCCAAGGTT AAGTGAACAA GAAAAAAGCA TGCATGCTGA CCTGGTCAAC
CAAATAGGCA AAAAAGCTTT ATGGAATCAG TTCAAGATCC CTTAA
 
Protein sequence
MREIIFDTET TGLDKDNDRI IEIGCVEMVD RYLTGRQFHV YLNPQGVIIP DEVVAIHGLT 
NERLKGEKKF DDIADELLEF IDGAMMIAHN ANFDISFLNA ELKRVNKPLI SIDNVIDTLA
MARRKFPMGP NSLDVLCKRF GIDNSHRILH GALLDAEILA DVYIELIGGK QGTLGFYNSN
GRHLNTENGS NISYVFKIRP QALPPRLSEQ EKSMHADLVN QIGKKALWNQ FKIP