Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4139 |
Symbol | |
ID | 4672212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4424429 |
End bp | 4426015 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639841177 |
Product | extracellular solute-binding protein |
Protein accession | YP_988316 |
Protein GI | 121596420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.414652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAC GTACCACCTT CAAACTGGGC TTGCTGGGGG CCGCCGTGCT CGTGGCCATG GGCACCGCCC ACGCCGCCAC CATGCGCTGG GCCGGCGCCA ACGACATCCT CACCGTGGAC CCCCACGCGC AGAACCACCA GACCACGCAC GCCTTCCTGC AGCAGGTGTA CGAGAGCCTG GTGCGCTATG ACGACAAGTA CCAGATCGAG CCCGCGCTGG CCACCAAGTG GACGCAGGTC TCCCCCACAC AGGTGCGTTT TGAACTGCGC AAGGGCGTGA AATTCCATGA TGGTGCGCCA TTCACGGCCG ATGACGTGGT GTTCTCGCTC ACGCGCGCCG GCACGGCGCC GTCCAACATG ATGTCCGCGG TGCAGAGCGT CAAGGAAGTC AAGAAGGTGG ACGAGCACAC CGTGGACGTG TTCCTCAAGG GCCCCAATCC CATCCTGCTG CGCGAGCTGA CCGAAGCGCG CATCATGAAC AAGGCCTGGG CCGAGAAGCA CAACTCGGTG AAGTCGCAAG ACTACGCGGG CAAGGAAGAG AACTACGCCT CGCGCAACGC CAACGGCACG GGCCCCTTCG TCATGGTGGG CTGGCAGCCG GACGTGAAGG TCACGCTCAA GAAGAACCCC AACTGGTGGG ACAAGCCCAA GGGCAACATC GACGAGGTGG TGTTCACCCC CATCAAGTCG GCCGCCACGC GCTCGGCCGC GCTGATCTCG GGGCAGGTGG ACTTCGTGGT CGACCCGCCG CCGCAGGACC TGGCGCGCAT GAAGGCCAAC CCCGACATCA AGCTCATCGA AGGGGCCGAG AACCGCACCA TCTACCTGGG CCTGGACCAG TTCCGCGACG AGCTGCCCGG CGCGGGCACG GCCGGCAAGA ACCCGCTCAA GGACAAGCGC GTGCGCCAGG CGCTGTACCA GGCCATCGAC TCTGCGGGCC TGCACAGCCG CACCATGCGC AACCTGTCGG TGCCTGCGGG CACCATGATC GCTCCCATGG TGCATGGCTG GACCAAGCAA CTGGACGAGC GTGCCGCCAA GTACGACGTG GAGGCCGCCA AGAAGCTGCT GGCCGACGCC GGCTACCCGA ACGGCTTCTC GCTCAAGCTC GACTGCCCGA ATGACCGCTA CGTGAATGAC GAGGCCATCT GCCAGGCCGT CACGGCCATG TGGACGCGCA TCGGCGTCAA GACCAACCTG CAAACCGCGC CTATGGCGCA GTTCGTCACC CGCGTGATGA ACAACGACGT GAGCGCCTAC CTGTTCGGCT GGGGCGTGGC CACGTTCGAC GCGCTGTATT CGCTGGACTC GCTGATGTCT ACCAAGGACG GCAAGACCTC GGCTGGCGTC TACAACGGCG GGCGCTTTTC CGACGCCAAG CTCGACGGCA TGATCCAGCA GATCAAGGTC GAGATGGATG CCCCCAAGCG CGACGCGCTG ATCAACGACG CGCTCAAGCT GGTCAAGGAC GAGTACTACT ACCTGCCCCT GCACCACCAG ATCCGCCCCT GGGCGATGCG CAAGAACGTG GACACGCCGC ATCGCGCGGA CGATCGCCCC ATGCCCGCGT GGACGACCAT CAAGTGA
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Protein sequence | MIQRTTFKLG LLGAAVLVAM GTAHAATMRW AGANDILTVD PHAQNHQTTH AFLQQVYESL VRYDDKYQIE PALATKWTQV SPTQVRFELR KGVKFHDGAP FTADDVVFSL TRAGTAPSNM MSAVQSVKEV KKVDEHTVDV FLKGPNPILL RELTEARIMN KAWAEKHNSV KSQDYAGKEE NYASRNANGT GPFVMVGWQP DVKVTLKKNP NWWDKPKGNI DEVVFTPIKS AATRSAALIS GQVDFVVDPP PQDLARMKAN PDIKLIEGAE NRTIYLGLDQ FRDELPGAGT AGKNPLKDKR VRQALYQAID SAGLHSRTMR NLSVPAGTMI APMVHGWTKQ LDERAAKYDV EAAKKLLADA GYPNGFSLKL DCPNDRYVND EAICQAVTAM WTRIGVKTNL QTAPMAQFVT RVMNNDVSAY LFGWGVATFD ALYSLDSLMS TKDGKTSAGV YNGGRFSDAK LDGMIQQIKV EMDAPKRDAL INDALKLVKD EYYYLPLHHQ IRPWAMRKNV DTPHRADDRP MPAWTTIK
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