Gene Ajs_4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4128 
Symbol 
ID4672663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4413574 
End bp4414023 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID639841166 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_988305 
Protein GI121596409 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AACTGTACGT CGGCAATCTG CCGTACTCGG TGCGTGACCA AGATCTGGAG 
CAAGCCTTCA GCCAGTTCGG TGCGGTGACC AGCGCCAAGG TCATGATGGA GCGCGACACC
GGCCGCTCCA AAGGCTTTGG CTTCGTGGAA ATGGGCAGCG ATGCCGAGGC CCAGGAAGCC
ATCAATGGCA TGAACGGCCA GTCCCTCGGC GGCCGCAGCA TTGTCGTGAA TGAAGCCCGT
CCCATGGAAG CGCGCCCCCC CCGCAGCGGT GGCGGCGGCT TTGGTGGGGG TGGCGGCTAC
GGCGGCGGCC GCAGTGGCGG TGGTGGCGGC TACGGCGGCG GCGGTGGTGG CCGCAGCGAA
GGCGGCTTTC GCAGCCCCTA CGGCTCCGGT CCACGTGGCG GCGGCGGTGG CCGTGGCGGC
TACGGCGGTG GCGGCAACAA CGGATATTGA
 
Protein sequence
MGNKLYVGNL PYSVRDQDLE QAFSQFGAVT SAKVMMERDT GRSKGFGFVE MGSDAEAQEA 
INGMNGQSLG GRSIVVNEAR PMEARPPRSG GGGFGGGGGY GGGRSGGGGG YGGGGGGRSE
GGFRSPYGSG PRGGGGGRGG YGGGGNNGY