| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4119 |
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| Symbol | |
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| ID | 4672972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4402586 |
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| End bp | 4403734 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639841157 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_988296 |
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| Protein GI | 121596400 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.898336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCAGG AGGCCACGGG CCGCCGCGGC CTTGCCCAGC GGACGCTGGA TGCACTCATC
ACGACCGATC CCCATCAGCG CATCCGCCTG GCCATGGCGG GGGTGTCGGC GCTGCTGATG
CTGGGCTGCA TCGGGGCGAT GCACCTGGTG GCCGCCGCAG GCCTGACCTA TCCCGTGCCG
GTGTACTGGT GGACCCTGGC GTGCGGCGCG GGCATCACCA CGGTGTTCGT GCTCATCCGC
AGCGGCGCCA GCCGGCGCTT TGCCGACCCG TCGCTCACGC TGTTCCAGAT CGTCTATGCG
ATTGCCTGCA ACGCGGCGGC CTATGTGATC GCCGGCCCCG CGCGCGGCAT TGCGCCGCCC
ATTCTCGCGG TCATCATGAT GTTCGGCGTC TTCGGGCTCA CCCCCCGCCA GATGGTGGGC
GTGGCGCTCT ACGGGCTGGT GGCCTTTGGT GCAGCGGGCG CCGTGGTGCA GTGGTGGCAT
CCGGCTTGGC TATCGCCCGA CAGCCAGCCC CCGGCGCTGT CGGCGGCCTA CCTGGTCATG
ATCGCGGTGG TGCTGGCCAG CAGCACCTTT CTCACCACGC GCGTGCACAG CGCGCGGGCC
CGCCTGCGCA GCCAACAGCG CGAGCTGGCC GCCGCCGTGG AGCAGATCCG CGAACTGGCC
GTCCGCGACG AGCTCACAGG CCTGCCCAAC CGCCGCTACA TGCTGGAGAT GATGCGGCTG
GAGCATGCGC GCGCGCAGCG CAGCCGGCAG CCCCTGCTGC TGGCGCAGCT GGACCTGGAC
CATTTCAAGG CGGTGAACGA CACGCACGGC CATGCGGCCG GCGACGTGGC GCTGCAGTCG
TTCGCGCAGA CGGTGCACGG CTGCGTGCGG GCCAGCGACC TCCTGGCGCG CTGGGGCGGC
GAGGAGTTCC TGCTGCTCAT GGCCAATACC CACCCGGCGG ACGGCACGCG TCTGCTGGAG
CGCGTGCGCG CCACCGTGGC CGCCACGCCC GTGGCCCTGC CAGGCGGCAC GCAGCTGTCT
CTGACGGTGT CGGTCGGGCT GGCGGAACTG GCCCACGGCG AGAGCACCGC CGCGCTGCTG
CAGCGCGCGG ACGCGGCCCT CTACGGCGCC AAGCGCCTGG GGCGCAACCG CGTGCTGCTC
GCGCACTGA
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| Protein sequence | MNQEATGRRG LAQRTLDALI TTDPHQRIRL AMAGVSALLM LGCIGAMHLV AAAGLTYPVP
VYWWTLACGA GITTVFVLIR SGASRRFADP SLTLFQIVYA IACNAAAYVI AGPARGIAPP
ILAVIMMFGV FGLTPRQMVG VALYGLVAFG AAGAVVQWWH PAWLSPDSQP PALSAAYLVM
IAVVLASSTF LTTRVHSARA RLRSQQRELA AAVEQIRELA VRDELTGLPN RRYMLEMMRL
EHARAQRSRQ PLLLAQLDLD HFKAVNDTHG HAAGDVALQS FAQTVHGCVR ASDLLARWGG
EEFLLLMANT HPADGTRLLE RVRATVAATP VALPGGTQLS LTVSVGLAEL AHGESTAALL
QRADAALYGA KRLGRNRVLL AH
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