| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4089 |
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| Symbol | |
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| ID | 4674431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4365743 |
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| End bp | 4366726 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639841130 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_988269 |
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| Protein GI | 121596373 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.224372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA CCTGTTCTGA CCCGCGGCGG CTGGCGCTGC ATGGCCCCAC CATGGGCACG
CGCTGGTCGG TTACCTGCGA TGCGGCGCCG GACACCGATG TGCAGGCGCT GCAAACCGCG
CTGGCCGCCG CCGTGCAACT CGTGGATGCG CAGATGTCGC CCTGGCTGCC GGGCAGCGAT
CTCAACCGCT TGAACCACGC CCCCGTGGGG GCCTGGGTCA CGCTGCCCGC TGAAATCCTG
GAAGTATTGG TCTGCGCGCT GGACGTCTGC CGCCTGAGTG CGTGCGCCTT CGACCCGGCT
GCGGGTGCGC TGGTCGATGC CTGGGGCTTT GGAGCGGTGC GCGACGCTCC CGACGCCGAG
GCGATCCGCA CAGCCACCAG CGCGGCACCT GTCGCGCGCA CCCCCACGTA CGAGGCGCTG
GAGCTGGACA GCGGCATGCT GCGCGCCCGC AAGCACGCAC CCGTGCACCT GGACCTGTGC
GGGATCGCCA AGGGCTACGC CGTGGACCGC ATGGCCGACG TGCTGCGGCA GAACGGCGTG
CCGCACGCCC TGGTGGCGCT GGACGGCGAG CTGCGCGCCG TGGGCGGCCA GGCCGATGGC
CAACCCTGGG CCGTCGCGGT GGAAAGCCCC GAGACCGGCC GCCGCGCCGT GCACAGCGTG
GTCGAACTGC AGGACCTGGC TGTGGCGACC TCGGGCGACT ACCGGCACTA TCTCCAGGTA
GGCGACGCAC GGCTGGCGCA CACCATGGAC ACGCGCCGTG GCGCCCCCGT GCGCAACGAA
GTCGCCTCTG TCACCGTGTT GGCACGCCAG TGCATGCACG CCGACGCCTG GGCCACCGCG
CTGCTGGTGG CCGGCCCTGG CGAAGGGCTG GCGCTGGCCC AGCGCATGGG GCTGGAGGCG
CTGTGGATGC TGAGGCGCGG CAACGGACTG GTCACGCTGG GGCTGGGCCG GTTCGGCTCG
GGCGCACCGG CGAGCGGGGT ATGA
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| Protein sequence | MPKTCSDPRR LALHGPTMGT RWSVTCDAAP DTDVQALQTA LAAAVQLVDA QMSPWLPGSD
LNRLNHAPVG AWVTLPAEIL EVLVCALDVC RLSACAFDPA AGALVDAWGF GAVRDAPDAE
AIRTATSAAP VARTPTYEAL ELDSGMLRAR KHAPVHLDLC GIAKGYAVDR MADVLRQNGV
PHALVALDGE LRAVGGQADG QPWAVAVESP ETGRRAVHSV VELQDLAVAT SGDYRHYLQV
GDARLAHTMD TRRGAPVRNE VASVTVLARQ CMHADAWATA LLVAGPGEGL ALAQRMGLEA
LWMLRRGNGL VTLGLGRFGS GAPASGV
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