| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4058 |
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| Symbol | pyrF |
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| ID | 4673518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4323191 |
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| End bp | 4324111 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639841099 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_988238 |
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| Protein GI | 121596342 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.186048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGGGCA GGCGCCGTCC TTGCCGAAGC CGCCCGCGAA AACACCTGGA CGCCGTGGTG
CACGGCACCG GCATGGTGTT GCCTAAAATC ACGGACATGA CTTTTCTTGA CATGCTGCGC
GACGCCACCA CGCGCAACGA CTCCCTGCTG TGCGTGGGCC TGGACCCCGA ACCCACGCGC
TTTCCCGAGT CCGTGCGTGG CGAGGCGCAC AAGATCTACG ACTTCTGCGC CGCCATCGTG
GACGCCACGG CCGACCTGGT GTGCGCCTTC AAGCCGCAGA TCGCCTACTT CGCTGCGCAC
CGTGCCGAAG ACCAGTTGGA GCGCCTGATG CAGCACATGC GCTGCAACGC CCCGCATGTG
CCCGTGATCC TGGACGCCAA GCGCGGCGAC ATCGGCTCCA CGGCCGAGCA ATACGCCAAA
GAGGCCTTCG AGCGCTACGG CGCGGATGCC GTGACGCTCT CGCCCTTCAT GGGCTTTGAC
TCCATCGAGC CCTATCTGGC CTACCACGGC AAGGGTGCTT TCCTGCTGTG CCGCACCTCC
AACCCTGGTG GCGATGACCT GCAGGCCCAG CGCCTGGCCA GCGTCGAAGG CCAGCCGCTG
CTGTACGAGC ACGTGGCCCG CCAGGCGCAG GGCCCCTGGA ACAAGAACGG CCAGCTCGGC
CTGGTGGTGG GCGCCACGTA CCCGCAAGAA ATTGAGCGCG TGCGTGCGCT GGCACCCACG
CTGCCGCTGT TGATCCCCGG CGTGGGCGCG CAGGGCGGCG ACGCAGCCGC CACGGTGCGC
GCCGGACTGC GCGCCGACGG GCCGATCATC GTGAACTCCT CGCGCGCCGT GCTCTACGCA
TCCAGCGGTG CGGACTTTGC CGCGGCCGCA CGCAACGCAG CCCAGGCCAC GCGCGCCGCG
CTCAACGCCG CGCGCGCCTA G
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| Protein sequence | MPGRRRPCRS RPRKHLDAVV HGTGMVLPKI TDMTFLDMLR DATTRNDSLL CVGLDPEPTR
FPESVRGEAH KIYDFCAAIV DATADLVCAF KPQIAYFAAH RAEDQLERLM QHMRCNAPHV
PVILDAKRGD IGSTAEQYAK EAFERYGADA VTLSPFMGFD SIEPYLAYHG KGAFLLCRTS
NPGGDDLQAQ RLASVEGQPL LYEHVARQAQ GPWNKNGQLG LVVGATYPQE IERVRALAPT
LPLLIPGVGA QGGDAAATVR AGLRADGPII VNSSRAVLYA SSGADFAAAA RNAAQATRAA
LNAARA
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