Gene Ajs_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4054 
Symbol 
ID4673348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4319848 
End bp4320597 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID639841095 
ProductAzlC family protein 
Protein accessionYP_988234 
Protein GI121596338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.557844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC CTTTCCTGCG CGCCCAGCTG CGCGACCCGG CCTTCCGCCA GGGCGCCGGT 
GACATGGCCG GCACCTGCCT GGGCATCGGC GCCTGGGGCC TGGTGACGGG CGTGGCCATG
GCCAAGAGCG GCATGTCGCT GCCGATGGCG CTGTTCATGT CGCTGGCGGT GTATGCCGGC
AGCGCACAGC TGGCCGTGCT GCCGCTGATG GTGGCGGGCG CACCGCTGTG GGTGGTGTGG
CTCACGGCCA CCTGCGTGAA CCTGCGCTTC GTGATCTTCA GCAGCATGTG GCGCAGCTAT
TTCGCCCACC TGCCGCGCCG CCACCGGCTG GCGCTGGGCT ACTTCAGCGG CGATGTGATC
TTCGTGAGCT TCATGAAGCG CTTTCCCAAG CCCGTGCCTG CGCCCGAGCA GGTGCCCTAT
TTCTGGGGCG CGGCCTCGGC CAACTGGCTG GCCTGGCAGG TGCCTTCCAT TGCGGGCATC
GTGCTGGCCA ACGCCATCCC GCTGTCCTGG GGGCTGGGCT TTGCGGGCGT GCTGGCGCTG
CTGGGCATCC TGCTGTCCAT GCTGAACGAC CGTGCCACCT GGCTCGCCAC GGCCGTGGCC
TGCACGGCGG CGGTGGCCAC CTTCGCGCTG CCGCTCAAGC TCAACATCCT GGTGGCGATC
GCCGCAGCCG TCACCGCAGG GCTGGCCGCC GAAGCGGCCG AGCGTGCGCT GCGGCGTGCG
CGTACCCGCG CGGTGGGAGG CGACACATGA
 
Protein sequence
MSLPFLRAQL RDPAFRQGAG DMAGTCLGIG AWGLVTGVAM AKSGMSLPMA LFMSLAVYAG 
SAQLAVLPLM VAGAPLWVVW LTATCVNLRF VIFSSMWRSY FAHLPRRHRL ALGYFSGDVI
FVSFMKRFPK PVPAPEQVPY FWGAASANWL AWQVPSIAGI VLANAIPLSW GLGFAGVLAL
LGILLSMLND RATWLATAVA CTAAVATFAL PLKLNILVAI AAAVTAGLAA EAAERALRRA
RTRAVGGDT