| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4040 |
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| Symbol | |
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| ID | 4672798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4304973 |
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| End bp | 4305509 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639841081 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_988220 |
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| Protein GI | 121596324 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.736529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTA CCCTGCAACA AGGTTTCACC TTGATCGAAC TGATGATCGT TGTGGCGATC
ATCGGTATTC TGGCTGCTGT AGCTTTGCCT GCTTATCAAG ACTACACTGT GCGCGCCAAG
GTGTCGGAAG TCGTTTTAGC TGGCTCCGCA TGCCGCACAG GTATTACTGA GGCTGTGCAA
AACTCTGGCG TTGCTGACGT TTCTGCCGAA CTGCCCAAGG CTTGCACTGT CAGCGGCAGC
AAGCTGGTGA CTGCTGGTAC AGAAACCAAT GGCGTTCCCA ACGCAGGTAG CGCCACTTTG
AGCGGTGCGG ATGCCAACGG CAAGATCTGG ATCAAGGCTG ATACCACCAA TCTGAACAAG
CTGACGGCCA GCACCAACGT TCTGACCATC ACGCCTATGG TTGACGCTAC CACCGCTTTG
GTGGGCACCA CAGACGGTGG CAAGAACATC CATGGCTGGC GTTGTGGCAA TACCACCGAT
GGCACCACCA TCCCTTCCAA GTATTTGCCC GCTTCCTGCC GCGGCACTTA CCCATAA
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| Protein sequence | MKRTLQQGFT LIELMIVVAI IGILAAVALP AYQDYTVRAK VSEVVLAGSA CRTGITEAVQ
NSGVADVSAE LPKACTVSGS KLVTAGTETN GVPNAGSATL SGADANGKIW IKADTTNLNK
LTASTNVLTI TPMVDATTAL VGTTDGGKNI HGWRCGNTTD GTTIPSKYLP ASCRGTYP
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