Gene Ajs_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3996 
Symbol 
ID4671116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4250242 
End bp4251207 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID639841036 
Producthypothetical protein 
Protein accessionYP_988176 
Protein GI121596280 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.96574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.364357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GCAAACTGAT TGCCGCGCTG GCGGTTACCT CTGTAGTTTC TGGAATGACC 
TTCGCCCAGG ACAACAGCCG TCCCCTGCGC ATCGTCGTGC CCTTCCCGCC GGGCGGCGCT
ACCGACATTG CCGGCCGCTC GCTGCAGGAA CCCCTGCAGC GCTTGCTGGG CCAGCCGGTG
GTGATCGAGA ACAAGGCCGG CGCGGGCGGC TCCATCGGCA TGGCCGAGGT GGCGCGCGCC
ACCGACGGGC TGACCTTCGG CGTGGCCACG TTGTCCACCC ACGGCGTGAA CCCGGCCGTG
CTGGGCAAGC TGCCCTACGA CCCCATCAAG GACTTCGTCG GCGTGACCGA GATCGTCAAG
GCGCCCGGCA TCATCGTGGT CAACCCCAAG GTGCTGCCCG TCAAGGACTT CGCCGACCTC
GTGAAGCACC TGAAGGCCCA TCCCGGCAAG GTGGAATACG CCACGCCGGG CAACGGCACC
ATCGGCCACA TGTGGGGCGA GCTGTTCAAG AGCGCCACGG GCACCAGCAT GGTGCACATC
CCCTACCGCG GTGCGGGTCC GGCCACCAAC GACGTGCTGG GCGGCCAGGT GCCGGTGTAC
TTCGACCAGG TGGCCTCGTC GCTGCCGCAC GTGAAGGCCG GCAAGCTCAA GGCCCTGGCC
GTGTCCTGGC ACGAACGCCT GGCCGTGCTG CCCGACGTGC CCACCTATGC CGAGCTGGGC
TACAAGCAGG CCAACGATGC GTCGTGGTTC GGCCTGGTGG CGCCCAAATC CACCCCCGCG
GCCCAGGTGC AGCGCGTGCA ACAGGCCGTG GCCCAGGCCC TCAAGGAGCC GGCGGTGCGC
GATCGCCTGG CGGCCCAGGG GCTGTATGCG TCGGGCACCA CGCCCGCCGA GTTCTCCGCG
CAGATCGCGC GTGAAATTGA CAAGATGAAA CAGGTGGCAG CCTATGCCAA GATCAAACTG
GATTGA
 
Protein sequence
MQRRKLIAAL AVTSVVSGMT FAQDNSRPLR IVVPFPPGGA TDIAGRSLQE PLQRLLGQPV 
VIENKAGAGG SIGMAEVARA TDGLTFGVAT LSTHGVNPAV LGKLPYDPIK DFVGVTEIVK
APGIIVVNPK VLPVKDFADL VKHLKAHPGK VEYATPGNGT IGHMWGELFK SATGTSMVHI
PYRGAGPATN DVLGGQVPVY FDQVASSLPH VKAGKLKALA VSWHERLAVL PDVPTYAELG
YKQANDASWF GLVAPKSTPA AQVQRVQQAV AQALKEPAVR DRLAAQGLYA SGTTPAEFSA
QIAREIDKMK QVAAYAKIKL D