Gene Ajs_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3973 
Symbol 
ID4671099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4228747 
End bp4229124 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content74% 
IMG OID639841015 
Producthypothetical protein 
Protein accessionYP_988155 
Protein GI121596259 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.370228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC TGGCAACCCC TTTCAACGAC GGCCTGCGCG CGGGCGTGGT GCGCTTTCAA 
AGCTGCGCCG CCTGCGGCCA TGCCCAGACC CTGGCGCGCT ACGCGTGCCA ACGCTGCGGC
CACGACGGGC TGGACTGGCG CGACGCCGCC GGCACCGCCA CCGTGCGCGC CACCACGGTG
GTGGCGCGCG CGCCCTCGGA GGACTTCCGC GCGCTGGCGC CCTACACGCT GGCGATCGTG
CAGCTCGACG AGGGCCCGCG CCTCATGGGC CACGCGGCCG CGGGCGTGCA GATCGGCGAG
CGCGTGCGCG CCGAATTCTT CGAGCACCTG GGCCGGCCGC TGCTGCGCTT CGTGCCAGAT
GAAGCAACAC CCCCCTGA
 
Protein sequence
MTSLATPFND GLRAGVVRFQ SCAACGHAQT LARYACQRCG HDGLDWRDAA GTATVRATTV 
VARAPSEDFR ALAPYTLAIV QLDEGPRLMG HAAAGVQIGE RVRAEFFEHL GRPLLRFVPD
EATPP