| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3950 |
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| Symbol | |
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| ID | 4672423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4203863 |
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| End bp | 4205542 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639840992 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_988132 |
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| Protein GI | 121596236 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0302713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC GCCCATGGCT TGGCGCCTAC CCGCAGGGCG TTCCTGCCGA CATCGACCCG
ACGCAGTACA CGTCGCTGGT GGAGCTGATG GAGCAGGCCT TCCGCGACTA TGCGGACCGC
ACGGCCTACA GCTTCATGGG CAAGGAGACC AGCTACCGCG AGACGGATGC GCTGAGTCGC
CAGCTCGCGG CCTACCTGCA GAGCCTGGGC CTGGTGCGCG GCGACCGCGT GGCGCTCATG
ATGCCCAACG TGCCGCAGTA CCCGATCGCC GTGGCGGCCG TGCTGCGCGC GGGCTTCGTG
GTGGTCAACG TGAACCCGCT GTACACCCCG CGCGAACTGG AGCACCAGCT CAAGGACTCG
GGTGCCAAGG CCATCGTCAT CATCGAGAAC TTCGCCGCCA CGCTGCAGGC CTGCATCGCC
AACACCCCCG TGCAGCACGT GGTGCTGTGC GCCATGGGCG ACCGGCTGGG CCTGCCCAAG
GGCCTGCTGG TCAACTACGT GGTGCGCAAC GTCAAGAAGC TGGTGCCGGC CTACCAGCTT
CCCGGCGCAG TGCGCTTCAA CGACGCGCTG GCCAAGGGCG CGGGCCTGCA GTTGAACAAG
CCGTCTTTGA AGAGCGACGA CATCGCACTG CTGCAGTACA CCGGCGGCAC CACGGGCGTG
AGCAAGGGCG CCGTGCTGCT GCACCGCAAC GTGATCGCCA ACGTGCTGCA GTCCGAGGCC
TGGAACAAGC CCGCGACGAG CAAGATCCCC GAGAGCGAGC AGCCCACGGC CGTGTGCGCG
CTGCCGCTGT ACCACATCTT CGCGTTCACG GTGAACATGA TGCTGTCCAT GCGCACGGGC
GGCAAAACCA TCCTCATTCC TAATCCACGC GATCTGCCGG CCGTGCTCAA GGAGCTGTCC
AAGCACACGT TCCACAGCTT CCCGGCGGTG AACACGCTGT TCAACGGCCT GGCCAACCAT
CCCGACTTCA ACACGGTCAA CTGGAAGAAC CTCAAGGTTT CCGTGGGCGG CGGCATGGCT
GTGCAGGCGG CCGTGGCCAA GCTCTGGCTG GACAAGACCG GCTGCCCAAT TTGCGAAGGC
TACGGCCTGT CGGAGACCAG CCCGTCGGCC AGTTGCAACC CGGTCACCGC CACGGAGTTC
TCGGGCACCA TCGGCGTGCC GTTGCCCAGC ACCTCCATGC GCATCTTGGA CGACGAGGGG
CACGACATCT CCGCCACCGG CCAGGCGGGC GAGATCGCCA TCAAGGGCCC GCAGGTCATG
GCCGGCTACT GGCAGCGCCC CGACGAGACC GCCAAGGTCA TGACCGAGGA CGGCTACTTC
AAGACCGGCG ACATCGGCGT GATGGACGCG CGCGGCTACT TCAAGGTGGT GGACCGCAAG
AAGGACATGG TGCTGGTCAG CGGCTTCAAC GTCTACCCCA ACGAGGTGGA GGACGTGGTG
GCGCTGATGC CCGGCGTGCT GGAATGCGCG GTGGTGGGCG TGCCCGACGA GAAGACGGGC
GAGGCCGTGA AGCTGGTCAT CGTCAAGAAG GACCCGGCGC TCACCGAGGC GCAGGTCAAG
GACTTCTGCC GCGCCAACCT CACGGGCTAC AAGCAGCCCA AGGTGATCGA GTTCCGTACC
GAACTGCCCA AGACCCCCGT CGGCAAGATC CTGCGCCGCG AGCTGCGCGA CAAGAAATAA
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| Protein sequence | MTDRPWLGAY PQGVPADIDP TQYTSLVELM EQAFRDYADR TAYSFMGKET SYRETDALSR
QLAAYLQSLG LVRGDRVALM MPNVPQYPIA VAAVLRAGFV VVNVNPLYTP RELEHQLKDS
GAKAIVIIEN FAATLQACIA NTPVQHVVLC AMGDRLGLPK GLLVNYVVRN VKKLVPAYQL
PGAVRFNDAL AKGAGLQLNK PSLKSDDIAL LQYTGGTTGV SKGAVLLHRN VIANVLQSEA
WNKPATSKIP ESEQPTAVCA LPLYHIFAFT VNMMLSMRTG GKTILIPNPR DLPAVLKELS
KHTFHSFPAV NTLFNGLANH PDFNTVNWKN LKVSVGGGMA VQAAVAKLWL DKTGCPICEG
YGLSETSPSA SCNPVTATEF SGTIGVPLPS TSMRILDDEG HDISATGQAG EIAIKGPQVM
AGYWQRPDET AKVMTEDGYF KTGDIGVMDA RGYFKVVDRK KDMVLVSGFN VYPNEVEDVV
ALMPGVLECA VVGVPDEKTG EAVKLVIVKK DPALTEAQVK DFCRANLTGY KQPKVIEFRT
ELPKTPVGKI LRRELRDKK
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