Gene Ajs_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3943 
Symbol 
ID4673055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4197120 
End bp4197614 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID639840985 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_988125 
Protein GI121596229 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG TGTTGCACAT CAACGCCGAC AAGTGCACCG GCTGCCTGCA GTGCGAGATG 
GCCTGCTCTT TCGAGAACTA CGGCGTCTTC GCCACCGCCA AGTCGCGCAT CAAGGTGTTC
GACTTTCACA CCACCGGCAA GAAGGTGCCC TACACCTGCA CCCAGTGCGA CGAGGCCTGG
TGCCTGCACG CCTGCCCGGT GGAGGCGATC ACGGTGGACA AGGCCAGCGG CGCCAAGATC
GTGCATGAGT CCACCTGCGT GGGCTGCAAG GTCTGCACCA TCGCCTGCCC CTTCGGCACC
GTGAACTACG TGGCCGACAC CGGCAAGGTG CAGAAGTGCG ACCTGTGCCA CGACCGCGCC
GAAGGCCCGG CCTGCGTGGA AGCCTGCCCG ACCACGGCCA TCACCTACAT CGACGCCAGC
TGGACTGGCC TGGAGCGCAT GAAGCAATGG GCCGACAAGC TCGGCAATCA AGCCAATCAG
CCCGCTGGCG CTTGA
 
Protein sequence
MQKVLHINAD KCTGCLQCEM ACSFENYGVF ATAKSRIKVF DFHTTGKKVP YTCTQCDEAW 
CLHACPVEAI TVDKASGAKI VHESTCVGCK VCTIACPFGT VNYVADTGKV QKCDLCHDRA
EGPACVEACP TTAITYIDAS WTGLERMKQW ADKLGNQANQ PAGA