Gene Ajs_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3940 
Symbol 
ID4673206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4194984 
End bp4195694 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content75% 
IMG OID639840982 
Productpeptidase M22, glycoprotease 
Protein accessionYP_988122 
Protein GI121596226 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TTGCCTTCGA CACCAGTACC GACGCGCTGT CCATCGCCGT GCAACACGGC 
GCGCGCGTGT GGCAGCACAG CGGCGCCGGC GGCGCCCAGG CCTCGGCCAC GCTGATCCCG
GCCATCCGCG ACTTGCTGGC GCAGGCCGGA CTGTCGTTCG ATCAGCTGGA TGCCGTGGTG
TTCGGGCGCG GCCCGGGCTC GTTCACGGGG CTGCGCACCG CGTGCGCGGT GGCCCAGGGC
CTGGCCTTTG GCGCGCGCGG CGGGCAGGGC GTGCCCGTGC TGCCGGTGGA CACGCTGCTC
GCCGTGGCCG AAGAGGCCCG CGCGCAGCAC GGCTGCACGC GGGTGGTGGC GACGCTGGAC
GCCCGCATGA ACGAGGTTTA CGCGGCACCC TTTGAGTGGC AGGCCGACGG CCGCTGGCAG
GTGCCGCAGG ACTTCCAGCT GCTGGCGCCC GAGGCCCTGG CCGTGCCGGA TGGTTGGACG
GTTGCCGGCA ATGCCCGCGC CGCCTACGGC GAGCGCCTCG CGCCGCAAGC CCCGCACATG
CACGCCCTGC CTACGGCGGC GGCCCTGCTG CGGCTGACAC CGGCGCTGCT GGCCGCGGGC
GCGGGCGTGG CGGCCGACGC AGCGCTGCCG CGCTACATCC GCGATAAAGT GGCGCAAACC
ACCGCCGAGC GAGAAGCCGC CCGCCAAGCC GCGCCGGCCC CCCAGACATG A
 
Protein sequence
MNLLAFDTST DALSIAVQHG ARVWQHSGAG GAQASATLIP AIRDLLAQAG LSFDQLDAVV 
FGRGPGSFTG LRTACAVAQG LAFGARGGQG VPVLPVDTLL AVAEEARAQH GCTRVVATLD
ARMNEVYAAP FEWQADGRWQ VPQDFQLLAP EALAVPDGWT VAGNARAAYG ERLAPQAPHM
HALPTAAALL RLTPALLAAG AGVAADAALP RYIRDKVAQT TAEREAARQA APAPQT