Gene Ajs_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3931 
Symbol 
ID4673928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4186652 
End bp4187560 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID639840973 
Productthioredoxin 
Protein accessionYP_988113 
Protein GI121596217 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCACCCTAGA GAATTTTGAA ACCGAGGTGG TTGCCGCCTC GATGCAAGTG 
CCCGTGCTGG TGGACTTCTG GGCACCCTGG TGCGGCCCCT GCAAGACGCT GGGCCCGGTG
CTGGAGAAGC TGGAGGTGGA ATACGCCGGC CGCTTCACCC TGGCCAAGAT CGACTCCGAC
CAGGAGCAGC AGCTGGCTGC CATGTTCGGC ATCCGCAGCA TTCCCACCTG CGTGCTGATG
ATGAATGGCC AGCCCGTGGA TGGCTTCATG GGCGCCCAAA CCGAGAGCCA ACTGCGCGCC
TTCCTGGACA AGCATGTGCC CAGCGCCGAG GAGCTGCAGG CCGAGGAGCA GGAAGAGGAA
GCCCTGGATG CGCTCGCCGA GGGCGATACC GAGGGTGCAC TGGAAAAGCT GCAGCACGCC
GTCGCCACCG ACCCGGCCAA CGACGACGCG CGCTTTGACT ACGTCAAGCT GCTGCTGCAG
CTGGGCCGCG AAGACGACGC CAAGGTGGCC TTCGCGCCGG TCATCGCCAA GGCCGAGGTC
TCGCGCCGCC TGGGGGCGCT CAAGGCGTGG ATGGATGCTC TTGATTTCGT AGCTTCTAGC
GCTTATGGGG CGGGCGCTGG AGCCGAATTT GATGCAAAGA TTGCGGCCAA CAAGCGCGAC
TTCGAGACGC GCTTTGCACG CGCACGCTGG CTCATGGCCC AGCAGCGCTG GCAGGAGGCC
ATGGACGAGC TGCTGGAAAT TCTCATGCGC GACAAGGCCT GGAACGACGA TGCCGCGCGC
AAGGCCTACG TGGCCGTGCT GGAGATCATC GAGCCCCCGA AGGTCAAGGT GGCCGACGGG
CAGATCCCGC CCGAAGACCC GGTGGTGGCC AGCTACCGCC GGCGCTTGTC CAGCGTGGTG
CTGAGCTGA
 
Protein sequence
MIDVTLENFE TEVVAASMQV PVLVDFWAPW CGPCKTLGPV LEKLEVEYAG RFTLAKIDSD 
QEQQLAAMFG IRSIPTCVLM MNGQPVDGFM GAQTESQLRA FLDKHVPSAE ELQAEEQEEE
ALDALAEGDT EGALEKLQHA VATDPANDDA RFDYVKLLLQ LGREDDAKVA FAPVIAKAEV
SRRLGALKAW MDALDFVASS AYGAGAGAEF DAKIAANKRD FETRFARARW LMAQQRWQEA
MDELLEILMR DKAWNDDAAR KAYVAVLEII EPPKVKVADG QIPPEDPVVA SYRRRLSSVV
LS