| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3894 |
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| Symbol | |
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| ID | 4673470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4135807 |
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| End bp | 4137180 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639840928 |
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| Product | sun protein |
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| Protein accession | YP_988077 |
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| Protein GI | 121596181 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAGC CTACTTCCAT CCCGACGCAG GGGGCTCCCG CGGTTGCGTT GAGCCAGTTG
CTGGACGCCA CCGCCTTGGC GCTGCAGGCG GTGCGCGCAG GGCAGTCGGG CACCGTGGCG
CTGGAGACCA CGGCTGCCGC GCTGCGCCCC GGCGTGCAGG CGCTGCTGTT CCAGGTGCTG
CGCCACCTGG GGCGCGCACA GGCCTTGCGC CGCCAGCTGG CACCCCGCAA CCCACCGCCG
CGGGTGGATG CGCTGCTGTG CACCGCCCTG GCGCTGGCCT GGGACCCGCA GGCCGCTCCC
TACGCGCCGT TCACCCTGGT CAACCAGGCG GTCGAGGCCG CCAAGCGCCA CCCCGCGACG
CGGGCGCAGG CGTCTTTCGT CAACGCCTGC CTGCGGCGCT TCCTGCGTGA GCGCGACACG
CTGGTGGCCG CCACGCAGGG CGACGAGGTC GCCGTGTGGA ACCACCCCGC ATGGTGGATC
CAGCGCCTGC GCCGAGACCA CCCCGATCAG TGGCAGCAGA TCCTGCAGGC GAACAATGCG
CCCGCGCCCA TGGTGCTGCG GATTTCTAAG TCAAAAAGCA CTCCAGCGCT TTACCAGCAA
GCGTTAGAAG CTATCAATAT TGAAGCGATG GCGGTAGGCC CCGAAGGGCT GGCGCTGGCA
CGCCCCGTGC CGGTGCAGCA ACTGCCTGGC TTTGCAGAGG GTGTTGTCTC GGTGCAGGAT
GCCGCCGCGC AGATGGCGGC GCCGCTGCTG CTCAACGGGC TGGACGCCGC GCAGCCGCTG
CGCTTATTGG ATGCCTGCGC CGCCCCCGGC GGCAAGACCG CCCATTTGCT GGAATGGGCC
GCCGCACTGC GGGCCCCTTG GCGGGTCACC GCGTTGGAGG TGGATGCGGC ACGCGCCGAG
CGCATCCATG ACAACCTGCA TCGCCTGGGA CTGAGCGCTC AGGTGCTGGT GGCCGATGCC
GCCGTGCCCG CCGACTGGTG GCAGCAGGCC AGCGGTGGTG AGCTGTTCGA CGCGATCTTG
CTCGACGCGC CCTGTACCGC CTCGGGCATC GTGCGCCGCC ATCCCGACGT GCGCTGGCTG
CGGCGCGAGA GCGACGTGGC CCAGCTGGCC GCGCAGCAGT CGCGTCTGCT GGCGGCGCTG
TGGCCGCTGC TGCGCCCTGG CGGGCGGCTG CTGTATTGCA CCTGTTCGGT GTTCCGGGCC
GAGGGCGACG GGCAGATCGC AGCGTTTCTT GCGCACAACA CTGACGCACG CCTGCTGCCG
TCGCCGGGCC ATTTATTCCC CGGCAGACCA GACAAGCGCG ACGGGCTCCG TGACAATGGG
CCGGGTGAAC ACGACGGTTT CTTTTACGCC CTGTTGCACA AGGCCTCCGC CTGA
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| Protein sequence | MNKPTSIPTQ GAPAVALSQL LDATALALQA VRAGQSGTVA LETTAAALRP GVQALLFQVL
RHLGRAQALR RQLAPRNPPP RVDALLCTAL ALAWDPQAAP YAPFTLVNQA VEAAKRHPAT
RAQASFVNAC LRRFLRERDT LVAATQGDEV AVWNHPAWWI QRLRRDHPDQ WQQILQANNA
PAPMVLRISK SKSTPALYQQ ALEAINIEAM AVGPEGLALA RPVPVQQLPG FAEGVVSVQD
AAAQMAAPLL LNGLDAAQPL RLLDACAAPG GKTAHLLEWA AALRAPWRVT ALEVDAARAE
RIHDNLHRLG LSAQVLVADA AVPADWWQQA SGGELFDAIL LDAPCTASGI VRRHPDVRWL
RRESDVAQLA AQQSRLLAAL WPLLRPGGRL LYCTCSVFRA EGDGQIAAFL AHNTDARLLP
SPGHLFPGRP DKRDGLRDNG PGEHDGFFYA LLHKASA
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