Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3860 |
Symbol | |
ID | 4671395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4098504 |
End bp | 4099430 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639840893 |
Product | LysR family transcriptional regulator |
Protein accession | YP_988043 |
Protein GI | 121596147 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGA GCTTCAACTA CCGCCACCTG TACTACTTCT GGGTCGTCGC CAAGGAGGGC GGCATGGCAC GGGCCGCCGA GCGGCTGGAC ATGGCCGCGC AGACCATCAG CGCACAGGTG CGCGAGCTGG AGAAGTCCCT GGGGGTGAGC CTGCTGCGCG CCGAGGGCCG CAACCTCATG CTGACCGAGG CCGGCGTGGC CGCGCTGCAC GAGGCCGACC ACATCTTCGC GCTGGGCGAG CAGCTGCCCC AGCGCGTGCG CGAGGCCGCC TCGGGCCCCA CATTGCGCCT GAACCTGGGC ATCTCCGACG GCATTGCCAA ACTGGCGGTG CACCGGCTGC TCACCCCCGT GCTGGACGAG CCCCACCTGC GCCTGCTGTG CCACGAGGGG GAATTCCAGC CCCTGCTGGG CGAGCTGGCG CTGCACAAGC TGCACGCGGT GCTGGCCGAC CGCCCCGCCC CGCCGAACCC GGCGCTGCGC ACCACCAGCC AGTTGCTGGG CACCAGCGCC ATTGGCTGGT ATGCCCCGCC GCTGTGGGCG CAGGCCGCGC GCCACGAATT CCCGCGCAGC CTGGCGGTGG TCCCTGTGCT GTTGCCCACC GAGCACGCCG CGCTGCGCGC GCGCATCGAC CACTGGCTGG AACGCGAGCG CATCCGCCCG CGCATTGCAG GGGAATTCGA GGACAGCGCC CTGCTCAGCA CCTTCGCAGC CACCGGCATG GGCGTGATGC CCGCGCCCGA GACCCTGGGC GCGCACCTGG AGCAGACCCA TGGCCTCGTG CCCGTGGGCA CCACCCCCGA GGTGCATGAG CAATTCCACC TGATCTACAG CGCCCGCAAG GTGATGCACC CGCTGCTGAC CCGGCTGCTG GAGGCCGGAG CCGATGGGAC GCTGTGGAAC CCGGACCCCA CCCGTTCCCC CGTCTGA
|
Protein sequence | MSQSFNYRHL YYFWVVAKEG GMARAAERLD MAAQTISAQV RELEKSLGVS LLRAEGRNLM LTEAGVAALH EADHIFALGE QLPQRVREAA SGPTLRLNLG ISDGIAKLAV HRLLTPVLDE PHLRLLCHEG EFQPLLGELA LHKLHAVLAD RPAPPNPALR TTSQLLGTSA IGWYAPPLWA QAARHEFPRS LAVVPVLLPT EHAALRARID HWLERERIRP RIAGEFEDSA LLSTFAATGM GVMPAPETLG AHLEQTHGLV PVGTTPEVHE QFHLIYSARK VMHPLLTRLL EAGADGTLWN PDPTRSPV
|
| |