| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3840 |
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| Symbol | |
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| ID | 4670678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 4074587 |
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| End bp | 4076047 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639840873 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_988023 |
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| Protein GI | 121596127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGTTTT TGGGCCGTAG CGCACAATCC AGGCGCGCAG ACCACTATCA AATCATGAGC
AAATCCGGCC CTTCAAGCAC CGACGCCTCC CGCGCCCACG CAGCCACCAG CCGCGGCGCC
TTCTCCTCCA GCCTGGGCGT GCTCGCCGCC ACGCTGGGTT CCGCCGTCGG GCTGGGCAAC
ATCTGGAAGT TCCCCTCGCT CACCGGGGCC AACGGCGGCG CGGGCTTTCT GCTGATCTAC
CTGCTCTCGA CGCTGTTCAT CGGCCTGCCG CTCATGGTGG CCGAGATCGC CATCGGCCGC
CAGGCGCGCG CCAATCCCAT CTCTGCGCTG CGCCAGTTGC AGCCCCGCGG CGCGCCGTGG
TGGCTGATCG GCGTGGCAGG CATGGCGGCG GCGTTCCTGA TCATGGCGTT CTATTCCGAG
GTCGTCGCCT GGGTGTTTGC CTACGTGGCC AAGGCCCTGT CGGGCAACCT GCTGTCCAGC
GACCCGGTGC AGACGCAGGC CAGCTTCGAC GCCCTGGTGC GGGACCCGGT GCAGGCGCTG
CTGTGGCAGT GGGTGGTGCT GGCCTTCATC GGCGGCATCC TGCTGCTGGG CGTCACCCGC
GGCATCGAGG CGGCCACCAA ACGGCTGATG CCGCTGCTGT TCCTGCTGCT GGTGCTGCTG
GGCGGCTACA GCCTGACGCT GCCCGGCGCG GGCCAGGCGC TGTCGTTCCT GTTCGCGCCC
GAGTGGCACA AGATCACGCC CGCGGTGGTG CTGACCGCCA TGGGCCTGGC GTTCTTCAAG
CTGTCCATCG GCATGGGCAC GATGATGACC TACGGCAGCT ACTTCACCGC CGAGCAGAAC
ATCCCGGCCA CCGCCACGCG CGTGATGCTG GCCGACCTGT CGGTGTCGCT GCTGGCGGGC
ATGGCGATCT TCCCCGCGGT GTTCAGCTTC GGCTTCCAGC CGTCGGCGGG GCCATCCCTG
GTGTTCATCA CGATCCCCGC GGTGTTCGCG CAGATGCCGG GTGGCTCGGT GCTGCTGGCG
GCGTTCTTCC TCCTCACCGC CATCGCCGCG ACGGGCGCCA TGCTCTCCCT GATGGAGGTG
CCGGTCGTCA TCCTGCACGA GCGCTGGGGC CTGAGCCGGC CCCGGGCCAC GCTGCTCACG
CTGCTGATCC TGGGGCTGCT GGGCGCGGGC TGCGCCCTGA GCCAGAGCAC GCTGGCCGCC
TTCCAGCCGG GCGGGCGCAC CCTGTTCGAC TGGGCGGACT ACCTCTCGTC CAACCTGCTG
CTGCCCGCGG GGGGCATCGC CATCGCGCTC TTCGTCGGCT GGGCCTGGGG CGAGCGCGCG
TTCGCGGCGC AACTCTCCAA CCACGGGCAG TTGGGCAACC AGGGGCTGGC CCGCGTCGTG
AGCCTGCTGC TGCGCTGGGT CACGCCGGTG CTGATCCTGC TGGTCATGCT CGCGGGGCTG
GGGGTGTTCT CCGGCGCGTG A
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| Protein sequence | MVFLGRSAQS RRADHYQIMS KSGPSSTDAS RAHAATSRGA FSSSLGVLAA TLGSAVGLGN
IWKFPSLTGA NGGAGFLLIY LLSTLFIGLP LMVAEIAIGR QARANPISAL RQLQPRGAPW
WLIGVAGMAA AFLIMAFYSE VVAWVFAYVA KALSGNLLSS DPVQTQASFD ALVRDPVQAL
LWQWVVLAFI GGILLLGVTR GIEAATKRLM PLLFLLLVLL GGYSLTLPGA GQALSFLFAP
EWHKITPAVV LTAMGLAFFK LSIGMGTMMT YGSYFTAEQN IPATATRVML ADLSVSLLAG
MAIFPAVFSF GFQPSAGPSL VFITIPAVFA QMPGGSVLLA AFFLLTAIAA TGAMLSLMEV
PVVILHERWG LSRPRATLLT LLILGLLGAG CALSQSTLAA FQPGGRTLFD WADYLSSNLL
LPAGGIAIAL FVGWAWGERA FAAQLSNHGQ LGNQGLARVV SLLLRWVTPV LILLVMLAGL
GVFSGA
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