| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3836 |
|---|
| Symbol | |
|---|
| ID | 4670711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4068920 |
|---|
| End bp | 4069894 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639840869 |
|---|
| Product | flagellar rod assembly protein/muramidase FlgJ |
|---|
| Protein accession | YP_988019 |
|---|
| Protein GI | 121596123 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTG CGGCGCGACG GGAGGTGGAC ATGAGCCTTT CGCTCCCCAA TGCAGGCGCA
ACGTCCGCAC GCCAGGCGCT GGCCGTGGAC GGCCGCGCAC TCAACAGCCT CAAGGCGCAA
GCCAGCCAGG GCGACGCCCA GGCCACCAAG GACGCCACGC TGGAGGCGGC CAAGCAGCTC
GAATCCCTGT TCATGCGCGA GCTCATCAAG AGCATGCGCG AGGCCACGAT GAAGTCCGGC
CTGCTGGAGG GCGCCGAGGG CAACCTGGCC AGCGACCTGT TCGACCAGCA GCTGTCGGTG
CAGATGGCAG GCCAGCCGGG CGGGCTGGCC GAGGCCATCC AGCGCCAGCT CTCGCGCCAG
TTGGGCGGCG ACGGCCAGAC CACGCTGGTG CCGGGCTCCA CGCTGAGCAT GGACGTCGCG
CTGCGCAAGG CCGCGCCTGC CGACAATCCG CGTGCCGCGT CGCCCAAGGG GCGTGACGAC
TTCGTGCAGC ACCACCGCGC CGCGGCCGAG CGCGTGGCGC GCAGCAGCGG CATCCCCGCC
AGCTTCATGC TGGGCCAGGC CGGGCACGAG ACAGGCTGGG GCAAGGGCGA GATCCGCCAC
AAGGACGGCA GCAACTCCTT CAACCTGTTC GGCATCAAGG CCGGTAAGGG CTGGACCGGC
AAGGTGGCCG AGGTGACCAC CACCGAATAC ATCAACGGCG CGCCGCGCAA GGTGGTCGCC
AAGTTCCGCG CCTACGACTC GTTCGAGGAG TCGTTCCGCG ACTACGCACG CCTGATCAAC
GACAACCCGC GCTACGAGAA GGCGCGCGAG AAGACCCATT CCGCCGTCGC CTACGCCACG
GAGCTGCAGA AGGCCGGCTA CGCCACCGAT CCGCAATACG CCGCCAAGCT CAGCCGCGCC
ATCCAGAGCA CGCTGGGCAT GGCGCGCACC CCCAGCGCGC CCGTGCTGGC CCAGGCATCC
GGCACGCAGG CCTGA
|
|---|
| Protein sequence | MPRAARREVD MSLSLPNAGA TSARQALAVD GRALNSLKAQ ASQGDAQATK DATLEAAKQL
ESLFMRELIK SMREATMKSG LLEGAEGNLA SDLFDQQLSV QMAGQPGGLA EAIQRQLSRQ
LGGDGQTTLV PGSTLSMDVA LRKAAPADNP RAASPKGRDD FVQHHRAAAE RVARSSGIPA
SFMLGQAGHE TGWGKGEIRH KDGSNSFNLF GIKAGKGWTG KVAEVTTTEY INGAPRKVVA
KFRAYDSFEE SFRDYARLIN DNPRYEKARE KTHSAVAYAT ELQKAGYATD PQYAAKLSRA
IQSTLGMART PSAPVLAQAS GTQA
|
|---|
| |