Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3819 |
Symbol | |
ID | 4670845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4052759 |
End bp | 4053931 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840852 |
Product | type III secretion exporter |
Protein accession | YP_988002 |
Protein GI | 121596106 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.414984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGA GCCAAGACAA AAACCTCCCA GCAACCGAGC GCAAGCTCCA GAAAGCGCGC AGCGACGGCC AGGCCGCGCG CTCGCGGGAC CTGTCGCACC TGGCCATCCT GGGCATGGGC GCGCTGGCGC TGCTGGTGCT CGCGCCCTGG TTCGTGGAAT ACCTGCAGCG CGCGATGCGC CAGCAGCTCG CATTCAACGC GGCCACTGTG CAGGCGCCCG GCCACATGCT GGAGCGCCTG CAGACCATGG CGGGCGTGGG CCTGCTGGCC AGCGCCAGCT TCGCCGCGCT CACCGGCGGC GCGGCGCTGC TGAGCGCCGT GGGCGCCGGC GGCTGGGTCT TCAGCTTCAA GCCCATCACG CCGCAGTTCA ACCGGCTCAA CCCGCTGACC GGATTCACCA ACCTGTTTTC CAAGCAGCAA CTCGCCAACG TGAGCAAGAT GGTGCTCATG ACCGGCATCC TGTCGTTCGT GGCCTGGAAC TTCATGGGCC AGAGCATCGA GAAGATGGCC GCGCTGGTGC TGCAGCCTTC GCCCATGTCG CTGCGCCACG TGGGCGACTG GATCGTCTCG GGCACCAGCC TGCTGCTGCT GGTGGTGTTC CTGTTCGCCG TGGTGGACGT GCCGCTGCAG GCGTTCTTCT TCAAGTCGCG CCTGAAGATG TCGCACGAGG AAGTCAAGCA GGAGCACAAG GAATCCGACG GCAACCCGCA GCTCAAGGGC CGCCAGCGCC AGCGCGCGCG CGAGATCGCC GACGGCGCCA GCATCACCGC CGTGCCCAAG GCCGACTTCG TGGTCATGAA CCCCACGCAC TACGCCGTGG CCCTGAAGTA CGACGACGCC ACCATGGGCG CACCCCAGGT CGTCTCCAAG GGCACCGACC TGCTGGCCTT CAAGATCCGC GAAGTGGCCC AGGCGCATGG CGTGCCCGTG CTGCAGTCCC CCATGCTGGC GCGCGCGCTG TATGCGCACG CCGAGCTGGA GCAACCGATT CCCGCACAGC TGTACACCGC CGTGGCCCAG GTGCTGGCCT ACGTGTACCG CCTGAAGGCC GCGCTGCGCG GCGATGGCCG CATGCCCGAG GCCCAGCCCG ATCCCTACGT GCCGCCCGAG CTCGACCCCC ACAGCGCCCA CCCCACCCGG CGCCCCGCAC CCGCCACAGG TAACGCAAGA TGA
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Protein sequence | MSSSQDKNLP ATERKLQKAR SDGQAARSRD LSHLAILGMG ALALLVLAPW FVEYLQRAMR QQLAFNAATV QAPGHMLERL QTMAGVGLLA SASFAALTGG AALLSAVGAG GWVFSFKPIT PQFNRLNPLT GFTNLFSKQQ LANVSKMVLM TGILSFVAWN FMGQSIEKMA ALVLQPSPMS LRHVGDWIVS GTSLLLLVVF LFAVVDVPLQ AFFFKSRLKM SHEEVKQEHK ESDGNPQLKG RQRQRAREIA DGASITAVPK ADFVVMNPTH YAVALKYDDA TMGAPQVVSK GTDLLAFKIR EVAQAHGVPV LQSPMLARAL YAHAELEQPI PAQLYTAVAQ VLAYVYRLKA ALRGDGRMPE AQPDPYVPPE LDPHSAHPTR RPAPATGNAR
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