Gene Ajs_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3816 
Symbol 
ID4670860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4050515 
End bp4051456 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID639840849 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_987999 
Protein GI121596103 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.983249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA AGAAGCTCCA GCCCATCATC ATCAAGCGCG CCAAGAAGCG CCCCCATGCG 
CCGCACGGCG GCGCATGGAA GATCGCCTAC GCCGACTTCA TGACGGCCAT GATGGCCTTC
TTCCTGCTGA TGTGGCTGCT GGGCTCCACC GCCAAGGGCG AGCTGCAGGG CATTGCGGCC
TACTTTTCGT CGCCGCTCAA GGTGGCGATG CAGGGCGGCG ACGGGGCGGG CAACAGCTCC
AGCGTGATCC CGGGCGGCGG CAACGACCTG TCCAAGGTGC ACGGGCAGGT GCGCCGCTCC
AATTCCGACA GCCCCACCAA CATGCGCTCC AGCGTGGAGG CCTCGCGCGC CGAGCGTGCC
CGGCAGGACG CCCAGCGCAT CAAGGCCCTG CAGACCAAGA TCGAGGCGAT GATTACCGAG
AGCCCTCGCC TGAACGAATA CCGTTCGCAG ATCCGGCTGG ACCTGACACC CGACGGCCTG
CAAATCCAGA TCGTGGACGA TCAGAACCGC CCGATGTTCG ACAGTGGCAG CGCGCTGGTC
AAACCCTACA TGCGCGACAT CCTGCACCAG ATTGGTGCAG CTTTGGGCGG GGTAGAAAAC
CGCATCAGCC TGTCCGGCCA CACGGATGCC GTGCCTTATG GCAATGGCGA CCGCGGCTAC
AGCAACTGGG AGCTGTCGGC CGACCGCGCC AACGCCTCGC GACGCGAACT GGTGGCCGCA
GGCATGCCCG ACGCCAAGCT GGGCCGCGTG GTGGGCATGG CCGCCAGCGA TCTGCTGGAG
CCCCAGAACC CCCGCGCCGC CGTGAACCGA CGCATCACCA TCACCGTACT CACCCATGAA
GCCGAAGAGC GGCTCATGGG CAAAAAGAAC GTGGTATTTC CGTTACCGTC GCCCGTGGCA
GAAAAGCAGG ACAATCCAGC TTCCTCATCG CCGAATCAGT AA
 
Protein sequence
MAEKKLQPII IKRAKKRPHA PHGGAWKIAY ADFMTAMMAF FLLMWLLGST AKGELQGIAA 
YFSSPLKVAM QGGDGAGNSS SVIPGGGNDL SKVHGQVRRS NSDSPTNMRS SVEASRAERA
RQDAQRIKAL QTKIEAMITE SPRLNEYRSQ IRLDLTPDGL QIQIVDDQNR PMFDSGSALV
KPYMRDILHQ IGAALGGVEN RISLSGHTDA VPYGNGDRGY SNWELSADRA NASRRELVAA
GMPDAKLGRV VGMAASDLLE PQNPRAAVNR RITITVLTHE AEERLMGKKN VVFPLPSPVA
EKQDNPASSS PNQ