| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3773 |
|---|
| Symbol | |
|---|
| ID | 4671731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4004832 |
|---|
| End bp | 4005494 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639840803 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_987958 |
|---|
| Protein GI | 121596062 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG AAGCCCTTCT GTTTGACTGC GACGGCGTGC TGGTGGACAG CGAGGCCATC
ACCAATGGCG TGCTGTGCGC CATGCTGAAC GAGGCCGGCT GGGCGCTGGC GCCTGACGAG
TGCATGCGGA TCTTCATTGG CAAGACGGTG CGCAGCGAGG CCGCGCGCAT CGAGGCGCAC
ACCGGCCAGC CGCTGACCGA CGCCTGGATG GCCGCGTTTT ACGCGCGCCG CAACGCGCTG
CTGGAGGCCG AGCTGCAGCC GATCGAAGGC GCCATTGAGG CCGTGCGCGC CGTGCATGCG
CGCCTGGGCG GGCGCATTGC CTGCGCCTCG GGAGCCGACC GCTACAAGGT CGAAATGCAG
CTGCAGAAAG TGGGCTTGGC GCCGTACTTT GGTGCCAACG TGTTCAGCGG CCACGAAATG
CCGCGCACCA AGCCCGCGCC CGATGTGTAC CTGGCCGCTG CCGCCGCACT GGGCGTGCCG
CCGCAGCGCT GTCTGGTGGT GGAAGACACG GTGACGGGCG TTGCCGCCGG GGTGGCCGCC
GGCGCCACTG TGGTGGGCTT CAGCCCCTCG CTGGTGGGGC ACGGCGCACC CGAGGCCCTG
CTTGCCGCCG GGGCGGTGCG CGTCATTGCC CACATGAGCG AGCTGCCCGC CCTGCTGGGC
TGA
|
|---|
| Protein sequence | MNYEALLFDC DGVLVDSEAI TNGVLCAMLN EAGWALAPDE CMRIFIGKTV RSEAARIEAH
TGQPLTDAWM AAFYARRNAL LEAELQPIEG AIEAVRAVHA RLGGRIACAS GADRYKVEMQ
LQKVGLAPYF GANVFSGHEM PRTKPAPDVY LAAAAALGVP PQRCLVVEDT VTGVAAGVAA
GATVVGFSPS LVGHGAPEAL LAAGAVRVIA HMSELPALLG
|
|---|
| |