Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3748 |
Symbol | |
ID | 4672237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3975543 |
End bp | 3976655 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840778 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_987933 |
Protein GI | 121596037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.178822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCAT GGCATAAATG GGGGGCCGCC CTGGTCCTGG GCGCAACGCT GGGCGCAAGC CATGCACAGA TCCTGGTGGG GCAAACGGCC GGGTTCTCCG GCCAGGTGGC CGCAGGGGTG CAGGAGACCA CGCAGGGCGC CAAGCTGTTC CTGGACGCGG TCAATGGCAA GGGCGGCGTG CACGGGCAGA AGATCGAACT GATCTCGATG GACGACAAGT TCGACCCCAA AACCGCCGGC GAGAACGCGC GCACGCTGAT CGAGGACAAG AACGTGCATG TCATGTTCCT CACGCGCGGC ACGCCCCACA CCGAATCCAT GATCCCGCAC CTGGACAAGC ATGGCGTGGC CCTGGTGGGC CCGTCCACGG GCGCCATGGT GCTGCACCAG CCGGTGCGCA AGCACATCTT CAACGTGCGC GCCACCTACC AGCGCGAGGC CGAGAAGGCC ATGACCCACC TGGCCTCGAT GGGCATCACG CGCATCGCCG TGCTGTATGC GGACGACAGC TTCGGCGCCG ATGGCGTGAC GGGCGCGCAA AAAGGCCTGG CCCAGACCAA GCTGCAGCCC GTGGTGCTGG AGAAGTTCAA TCGCGCCAAG CCGGACTTCA CCCCGCTGGT GGCCAAGATC TCCCAGGCGC AGGCCCAGGC CGTCCTGATG GTCGCCTCGG GCACGTCGGT GGTGGATGGC TACAACGCGC TGCGCCAGGC GGGCTCCACG GCACAGGTGG TCACGCTGTC CAACAATGCC TCGGGCGGCT TCATCAAGAG CCTGGGCGAA AATGCCCGCG GCGTGATCGT CACGCAGGTC TACCCGAACG AGCGCAGCCT GACCTTCCCG CTGGTCAAGG AAGCCATCGA CCTGGCCAAG GCCAAGGGAA TGACCGAGGT CAGCCCGGCC ATGCTCGAAG GTTTTGCCGC CGCCAAGGTG CTGGTCGAAG GCCTGCGCCG CGCCGGCCCG AAGCCGTCGC GCGAGAAGAT CCAGACGGCC CTGGAATCCA TCCAGAAGTT CGATCTGGGC GGGCTGGACA TCTCCTACGG CCCCGACGAT CACACGGGTC TGGACTTCGC CGATCTTTCC ATCATCGGCA CGGACGGCAA GTTCCGCCGC TGA
|
Protein sequence | MQPWHKWGAA LVLGATLGAS HAQILVGQTA GFSGQVAAGV QETTQGAKLF LDAVNGKGGV HGQKIELISM DDKFDPKTAG ENARTLIEDK NVHVMFLTRG TPHTESMIPH LDKHGVALVG PSTGAMVLHQ PVRKHIFNVR ATYQREAEKA MTHLASMGIT RIAVLYADDS FGADGVTGAQ KGLAQTKLQP VVLEKFNRAK PDFTPLVAKI SQAQAQAVLM VASGTSVVDG YNALRQAGST AQVVTLSNNA SGGFIKSLGE NARGVIVTQV YPNERSLTFP LVKEAIDLAK AKGMTEVSPA MLEGFAAAKV LVEGLRRAGP KPSREKIQTA LESIQKFDLG GLDISYGPDD HTGLDFADLS IIGTDGKFRR
|
| |