| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3683 |
|---|
| Symbol | |
|---|
| ID | 4673551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3899199 |
|---|
| End bp | 3900044 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840715 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_987870 |
|---|
| Protein GI | 121595974 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACTACG CCTGTGTGGT ATCCACAACG TTTTGCGCTC GGCCAGCGCA GGTCTATACA
ATCGCGCCCC GGCAAAAACG CCCCCTGGGG CGCGTGCCAT TCGCACCGTG CTGCACGAGG
GGCCCTGGGC CCCGCACGCA GGCGGAAAAA GCCCGAACTG CGAGGAGACA GGAAGTGAAA
GCCCAGTCCA GCAAAGCCCA GGCTGCGGCC CAGGCCAAGC GCGCGGGCGA CGAACCCGCG
CCGGTAACCG CGCGGCGCCT CCGGCCTTCT CCTTCCGGTT CCGGGCAATT GACCGTACCA
TCCAAGGCCA CCGCGGCGGC GCCCGGCGCC CCCGAAGCCA GCTTTACCCA AACTATGCCT
ACGACCCTGC AAACCCCTGT GGCGGCCGCC AAGAAAGATC CCAAGCTGGC CAACAACTGG
AAGACCAAGT CTGCCGAAGA CCTGACGGAT GCCGAAGTGC TGGCCATGCC CGAGAGCGAG
TACATGAATG AGAAGCAGCT GGCGTTCTTC CGCCACAAGC TGGCTCAGCT CAAGCAGAAC
ATGCACCACA ACGCGGGCGA AACCACCGAG CACCTGCGCG AGGACACCGT GGTGGTCCCT
GATCCGGCCG ACCGCGCGAC GATCGAGGAA GAGCACGCGC TGGAACTGCG CACGCGCGAC
CGCGAGCGCA AGCTGCTCAA GAAGATCGAG CAGTCCATCG CGCGCATCGA CGCCGGCGAC
TACGGTTATT GCGACGAGAC GGGCGAGCCC ATCGGCGTAG GCCGCCTGCT GGCGCGCCCC
ACGGCCACGC TGTCGCTGGA GGCGCAGCAG CGCCGCGAAC TCAAGCAGAA AATGTTTGGC
GACTGA
|
|---|
| Protein sequence | MHYACVVSTT FCARPAQVYT IAPRQKRPLG RVPFAPCCTR GPGPRTQAEK ARTARRQEVK
AQSSKAQAAA QAKRAGDEPA PVTARRLRPS PSGSGQLTVP SKATAAAPGA PEASFTQTMP
TTLQTPVAAA KKDPKLANNW KTKSAEDLTD AEVLAMPESE YMNEKQLAFF RHKLAQLKQN
MHHNAGETTE HLREDTVVVP DPADRATIEE EHALELRTRD RERKLLKKIE QSIARIDAGD
YGYCDETGEP IGVGRLLARP TATLSLEAQQ RRELKQKMFG D
|
|---|
| |