Gene Ajs_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3627 
Symbol 
ID4674694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3832489 
End bp3833289 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID639840660 
Productcytochrome c assembly protein 
Protein accessionYP_987815 
Protein GI121595919 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.470506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAC CCAGTGCTTC CCCGCTCGGC TGGCTGCTCG CCCTGGCCAC CGCCGCCGCC 
TACGCGCTGG CGGCGGCCCT GGCGCCGCGC ACCTCCACAG GCCGCGGCCA ACTGGCCATC
ATGGCCCCTG CCTGGATGCT GCATGGCGCT GCGCTGGTCT GGGGCCTGCT GGGCAGCACG
CCGCATTTCG GCTTTGCCGC TGCCTTGTCG ATGACGGCCT GGCTGGTACT GACCACCTAC
GCCGTTGAGC GGCAGCTGTT TCCGCAGATG CGCGCGCGCT GGGTGCTGTG CGCACTGGGC
GGCGCGGCCG TGTTGGTGGC GGCGCTGTTT CCGGGCCGGC CACTGCACGT ATCCGCCTCG
CCCTGGCTGC CGCTGCACCT CACGCTGGGC ATTGCATGCT ATGGCCTGTT TGCCGCAGCG
GTGGTGCACG CCTGGCTCAT GAGCCGTGCC GAGCGCCAGA TGCGCCTGGC TGCCGATTCG
CACAGCGGCA TGCCGCTGCT GACGCTGGAG CGGCTCACGT TCCGCTTCGT GACGGCGGGC
TTTGTGCTGC TCTCGGCCAC GCTGGTGGCG GGCTGGCTGT TCAGCGAGCA GCTCTACGGC
CGCGCCTGGC TGTGGGACCA CAAGGCCGTG TTCTCGCTGC TGGCCTGGAT CACCTTCGCA
GTGCTGCTGC TGGGCCGCTC GCGCTTTGGC TGGCGCGGCC GCAGCGCCGT GCGCGTGCTG
TATGCAGGCA CGGCACTGCT GCTGCTGGCC TACGTGGGCT CGCGCTTCGT GATGGAAGTG
GTGCTGGGGC GGGCGGCATG A
 
Protein sequence
MILPSASPLG WLLALATAAA YALAAALAPR TSTGRGQLAI MAPAWMLHGA ALVWGLLGST 
PHFGFAAALS MTAWLVLTTY AVERQLFPQM RARWVLCALG GAAVLVAALF PGRPLHVSAS
PWLPLHLTLG IACYGLFAAA VVHAWLMSRA ERQMRLAADS HSGMPLLTLE RLTFRFVTAG
FVLLSATLVA GWLFSEQLYG RAWLWDHKAV FSLLAWITFA VLLLGRSRFG WRGRSAVRVL
YAGTALLLLA YVGSRFVMEV VLGRAA