Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3618 |
Symbol | |
ID | 4673990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3821896 |
End bp | 3822990 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840650 |
Product | GTP-binding protein YchF |
Protein accession | YP_987806 |
Protein GI | 121595910 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGA AATGCGGCAT CGTGGGCCTG CCCAACGTCG GCAAGTCCAC CCTCTTTAAC GCCCTCACCA AGGCCGGCAT TGCCGCCGAG AACTACCCTT TTTGCACCAT CGAGCCCAAC ACCGGCGTGG TGGAGGTGCC CGATCCGCGC CTGCAGCAGC TGGCAGAGAT CATCAATCCC GAGCGCATCG TGCCCGCCAT CGTCGAGTTC GTCGACATCG CGGGCCTGGT GGCTGGTGCC TCCAAGGGCG AAGGCCTGGG TAACCAGTTC CTGGCGCACA TCCGCGAGAC CGATGCCATC GTCAACGTGG TGCGTTGCTT CGAGGACCCG AACGTGATCC ACGTGGCCGG CCGCGTGGAC CCCATCGCCG ACATCGAGGT CATCCAGACC GAGCTGTGCC TGGCCGACCT GGCCACCGTC GAGAAGGCCC TGCAGCGCTA TAGCAAGGCG GCCAAGAGCG GCAACGACAA GGAAGCCGCC AAGCTGGTGC AACTGCTCAC GCCCATCCAG GCTGCGCTGG ATGAGGGCAA GCCGGCGCGC ACCGTGCCCG TGTCCAAGGA AGACGCGCCG CTGCTCAAGC AGTTCTGCCT GATCACCGCC AAGCCGGCGA TGTTCGTGGG CAACGTGGCC GAGGACGGTT TCGAGAACAA CCCCCTGCTG GACAAGCTCA AGGCCTATGC CGAGGCCCAG GGCGCGCCCG TGGTCGCCAT CTGCGCCAAG ATCGAGGCCG AGATGGCCGA GATGGGCGAC GAGGACCGCG ACATGTTCCT GCAGGAAATG GGGCTGGAGG AGCCGGGCCT GAACCGCCTG ATCCGCGCGG GCTTCAAACT GCTGGGCCTG CAGACCTACT TCACCGCCGG CGTGAAGGAA GTGCGCGCCT GGACCATCCA CGTGGGCGAC ACGGCGCCGC AGGCGGCCGG CGTGATCCAC GGCGACTTCG AGCGCGGCTT CATCCGCGCG CAGACCATCG CGTTCGAGGA CTTCATCCAG TACAAGGGCG AGCAGGGCGC CAAGGACGCG GGCAAGATGC GCGCCGAGGG CAAGGAATAC GTCGTCAAAG ACGGCGACGT GATGAACTTC CTCTTCAACG TCTGA
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Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN TGVVEVPDPR LQQLAEIINP ERIVPAIVEF VDIAGLVAGA SKGEGLGNQF LAHIRETDAI VNVVRCFEDP NVIHVAGRVD PIADIEVIQT ELCLADLATV EKALQRYSKA AKSGNDKEAA KLVQLLTPIQ AALDEGKPAR TVPVSKEDAP LLKQFCLITA KPAMFVGNVA EDGFENNPLL DKLKAYAEAQ GAPVVAICAK IEAEMAEMGD EDRDMFLQEM GLEEPGLNRL IRAGFKLLGL QTYFTAGVKE VRAWTIHVGD TAPQAAGVIH GDFERGFIRA QTIAFEDFIQ YKGEQGAKDA GKMRAEGKEY VVKDGDVMNF LFNV
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