Gene Ajs_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3610 
Symbol 
ID4673798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3814317 
End bp3815819 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content61% 
IMG OID639840642 
ProductN-6 DNA methylase 
Protein accessionYP_987798 
Protein GI121595902 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.578876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG CAGCTTCGAC AATCACACTC AGCCAGCTTG AAAGCCACCT CTGGGAATCC 
GCCAACATCC TGCGCGGCCC GGTGGATGCG GCTGACTTTA AGACCTACAT CTTTCCGCTG
CTGTTCTTCA AGCGCATCTG CGACGTCTGG GACGAGGAGT ACCAGGAGAT CGTCGATGAG
ACTGGCGATG AGCAATTGGC CTGGTTTCCC GAGTCGCACC GCTTCCAGAT CCCGGAAGAC
TGCCACTGGA ACGACGTTCG CACCAAGGCC AGCAATGTCG GGACGGCCCT TCAGCGCGCG
ATGCGCGAGA TTGAGAAGGC CAACCCCGAC ACCCTTTACG GCGTGTTCGG CGATGCCCAG
TGGTCGAACA AGGATCGGCT GTCTGATGCC TTGCTCAAGG ACCTGATCGA GCACTTCTCC
AAGCTGCCGT TTGGCAACAA GAACGTCAAC TCGGATCTGC TTGGCGACGC CTACGAATAC
CTGATCAAGA AGTTCGCCGA CGCCACCAAC AAGAAGGCCG GCGAGTTCTA CACCCCGCGC
AGCGTCGTGC GGCTGATGAT CGACATGCTC GATCCCAAAG AAGCCGAGAC CATCTACGAC
CCGGCCTGCG GTACCGGCGG CATGTTGCTG GCCGCTGTGC AGCACGTGAA GGAACAGCAT
GGCGACGTGA AGCGGCTGTG GGGCAAGCTG TACGGACAAG AGAAGAACCT CACCACCTCA
TCCATTGCGC GGATGAACTT GTTCCTCCAC GGCATTGAAG ACTTCCAGGT GGTGCGCGGC
GACACGCTGC GCAACCCGGC CTTCTTCGAG GTCGACCGAC TGGCCACCTT CGACTGCGTG
ATCGCCAACC CCCCGTTCTC GCTGGAAAAG TGGGGCGAGG ACCTGTGGCT GAACGATCCC
TTCGGCCGCA ACTTTGCTGG CCTGCCGCCC TCATCCAGCG GTGACTTTGC CTGGGTGCAG
CACATGGTCA AGTCAATGGC CGACGTCAGC GGCCGGATGG CCGTGGTGCT GCCCCAGGGC
GCCCTGTTCC GCAAAGGTGT GGAAGGCAGC ATCCGCCAGA AACTGCTGGA GATGGATCTG
GTCGAGGCCG TAATCGGGTT GGCGCCCAAC CTGTTTTACG GCACCGGCCT GGCCGCGTGC
ATCCTGGTCT TGCGCAAGCG CAAACCGGTC AAGCACAAAA AAAAGGTGCT GATCGCCGAT
GCGTCACGCC TGTTCCGCCG GGGCCGCGCG CAGAACTATC TGGAGCCCGA GCACGCCGCC
GAGATCCTCG GCTGGTATCG CGGCTTTGCC GATGTGCAGG ACACGGTCCG CGTGGTCAGT
CTCGACGAGA TCAAAGCCGA GGACTGGACG CTGAACATTT CGCGCTATGT GCTGCCGCCA
TTGCAGGAGG ACATCCCACC GCTGCCCGAT GCTATCGCGG CATTCAAGGA CGCGCTCACC
CGCTGCCGTG AAGCCGAAGA GCGGCTCGCG CAGGTCATGA CTGAAGGGGG ATGGCTGAAA
TGA
 
Protein sequence
MTQAASTITL SQLESHLWES ANILRGPVDA ADFKTYIFPL LFFKRICDVW DEEYQEIVDE 
TGDEQLAWFP ESHRFQIPED CHWNDVRTKA SNVGTALQRA MREIEKANPD TLYGVFGDAQ
WSNKDRLSDA LLKDLIEHFS KLPFGNKNVN SDLLGDAYEY LIKKFADATN KKAGEFYTPR
SVVRLMIDML DPKEAETIYD PACGTGGMLL AAVQHVKEQH GDVKRLWGKL YGQEKNLTTS
SIARMNLFLH GIEDFQVVRG DTLRNPAFFE VDRLATFDCV IANPPFSLEK WGEDLWLNDP
FGRNFAGLPP SSSGDFAWVQ HMVKSMADVS GRMAVVLPQG ALFRKGVEGS IRQKLLEMDL
VEAVIGLAPN LFYGTGLAAC ILVLRKRKPV KHKKKVLIAD ASRLFRRGRA QNYLEPEHAA
EILGWYRGFA DVQDTVRVVS LDEIKAEDWT LNISRYVLPP LQEDIPPLPD AIAAFKDALT
RCREAEERLA QVMTEGGWLK