Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3586 |
Symbol | |
ID | 4672942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3783259 |
End bp | 3784320 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639840618 |
Product | nifR3 family TIM-barrel protein |
Protein accession | YP_987774 |
Protein GI | 121595878 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.459705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG GCCCCATTCC CTTGGCCAAC CGCCTGTTCG TCGCCCCCAT GGCGGGCGTG ACGGACCGGC CGTTCCGCCA GCTGTGCAAG CGGCTGGGCG CCGGCTATGC GGTGAGCGAG ATGGTGACCT CGCGCAAGGA CCTGTGGAAC AGCCTCAAGA CCAGCCGCCG CGCCAACCAC GAGGGCGAGC CCGGCCCGAT CGCGGTGCAG ATCGCCGGCA CCGACGCGGC CATGATGGCC GTGGCCGCGC TCTACAACAT CGACCGCGGC GCACAGATCA TTGACATCAA CATGGGCTGC CCCGCCAAGA AGGTCTGCAA CAAGTGGGCG GGCTCCGCCC TGATGCAGAA CGAAGCCCTG GCCGTGGAGA TCGCCGAGGC CGTGGTGGCC GCCTGCGCAC CGCGCGGCGT GCCCGTCACA CTGAAGATGC GCACCGGCTG GTGCCAGCAG CACAAGAACG CCGTGGTGCT GGCGCGCCGC TTCGAAGACG TGGGCATCCA GATGCTCACG GTGCACGGCC GCACGCGCGA GCAGGGTTAC AAGGGCCAGG CCGAGTACGA CACCATCGCT GCCGTGAAGG CCGCCGTGCG CGTGCCCGTG GTGGCCAATG GCGACATCAC GTCGCCCGAG AAAGCCCGGG CGGTGCTGGC CGCCACAGGC GCCGACGCGG TCATGATCGG GCGCGCGGCC CAGGGCCGGC CGTGGATCTT CCGCGAGATC GGCCACTACC TCGCCACTGG CGAGCACCTC GCGCCGCCGC TGGTGGCCGA GGTGCGCCGC CTGCTGCTGG AGCACCTGCA GGACCACTAC GGCCTGTACG GCGAGGCCAG CGGCGTGCGC AGCGCGCGCA AGCACATCGC CTGGTATGTG CGCGCGCTGC CGGGCGGCGA GGCACTGCGA CAACACATCA ACACCATCGA GGACTGCGCG GCGCAGTGGC AGGCGGTGGC CGATTTCTTC AGCGCGCTGG GCGCGCAGAT GGACCGGCTG CCGTCCGCAC ACGACGGCGC CGACGCGGTC CCGCCCGTGA GGGAAACAGA GCATGAGCCG GAACAACATT GA
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Protein sequence | MQIGPIPLAN RLFVAPMAGV TDRPFRQLCK RLGAGYAVSE MVTSRKDLWN SLKTSRRANH EGEPGPIAVQ IAGTDAAMMA VAALYNIDRG AQIIDINMGC PAKKVCNKWA GSALMQNEAL AVEIAEAVVA ACAPRGVPVT LKMRTGWCQQ HKNAVVLARR FEDVGIQMLT VHGRTREQGY KGQAEYDTIA AVKAAVRVPV VANGDITSPE KARAVLAATG ADAVMIGRAA QGRPWIFREI GHYLATGEHL APPLVAEVRR LLLEHLQDHY GLYGEASGVR SARKHIAWYV RALPGGEALR QHINTIEDCA AQWQAVADFF SALGAQMDRL PSAHDGADAV PPVRETEHEP EQH
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