| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3574 |
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| Symbol | |
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| ID | 4672438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3766565 |
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| End bp | 3772645 |
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| Gene Length | 6081 bp |
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| Protein Length | 2026 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639840606 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_987762 |
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| Protein GI | 121595866 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.906934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.231875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTG TTGACGCCGC AAACGCACAG GGCGCCGATT GGGCCCAGGG CGAGCAGGAT
CTTGGGCCGC TCGCATGGGT GCTCGATGAA CTGCGCAAAT CCTTGGATGG TGCCGTCAAG
GCCATGCGCC GTTTCGTGCG CGATGCCGAG ATAGCGCGGG AGTCCGATCT CGCCTCACTG
GACGCGGGGC CCTTGCGCAT CGCACGCCAG CAACTCCACC AGGCCAGCGG CGCGCTGGAG
ATGGTGGGCA TGGCGCCTCC GGCCCTGGTG TTGCGCGCCA TGGAAACTGC GGTCCAGCGG
TTCGTTCATC GGCCGGAGAC CTGCAGCGAT GATGCAGCGG CCGTCATCGA GCGCGCCAGC
TTTGCCTTGA TCGAATACCT GGAGCATGTG CTCGCAGGCA AGTCCGTGTC GCCGGTGGCG
CTGTTTCCCC AGTACCGCGA GGCGCAGACG CTGGCGGGGG GCGAGCGGGT GCATCCGGCG
GACTTGTGGC CCGTGGAGCG GCGTTTCCAT GATCCTGACG TGCCGGTTGC CGCTGCGCCG
CTGCCCTATG GCTCGGAAGC GCGTGCGCGG CTGGACAGCG CGGTACTGCG GCTAGTGAAG
AATGCGGACC CGGGCGCCGC TGCAGACATG CAGACAACCT GCCTGGGCTT CGCCGCGGCG
CAGACCGACC GCCAGGCCCG CGCTTTCTGG AAGATCTGTG CAGGCTTTTT CGAGGCGCTG
GCGCAGCAGG CACTCAATCC GGACCTGTAT GCCAAGCGCG TCGCTTCGCG CGTGCTGATG
CAATACGCCA CCTTGGCCAA GGGGGACACG GCGATCAGCG ACCGTCTGGT GCAGGATCTT
CTGTTCTTCT GCGCCCAGGC CGTGGTGCCT GCGACGGCGG ATGCAGCTTC CCGCATGCCG
GTACTGACGG CCGTGCGGCG CGCGTTTGAT TTGAATCGCT ACCAGCCGGT GGACTATGAC
CAGCCGCGCT TCGGTCTTTT CGACCCTGCC ATTCTTGCGC AGGCGCGCAA GCGCATTGCC
GCGGCCACGG AAACCTGGTC CGCACTTGCG GGTGGAGACC GCAACAAGCT CAAACCGGCA
GCGGACCAGT TCAGCCTGGT GTGCGATTCA TTGCGCAAAC TGCACCCGGA CAGCGAAAGC
CTGGCACTGG CCCTGACGCG TGCCCTGGAG GCCACCACGC GGTCGGGCGA GCCTCCTTCG
GCAGCGCTGG CCATGGAAGT GGCCACCTCT GTGCTGTATC TGCAGGCGTC CTTCGAGGAA
CTGGATGCCG CCCAGCAGTA CATGGCGGAG CGAGCTGCGC GGCTGTCCGA GCGACTGGAC
AGCGTGGTTG CCGGCGGGGA ATCGCAGCCT CTTGAACCCT GGATGGAAGA GCTGTATCGC
CGCGTCAGTG ACCACCAGAC CATGGGTAGC GTGGTCGGTG AACTGCGTGC GACTCTGGCA
GAGGCAGAGA AGTCCATGGA CCAGTTCTTC CGCAGCCCGG AAGACATGAC CCTGCTTGCC
TCCGTGCCTG GCAGCCTGCA GCAGATGCGC GGCGTGCTGT CCGTGCTGGG ACTGGATCAG
GCCTCCTTGG CCGTGGTGCG CATGCGCGAC ACGGTCGAGC GCATGCTGAC CAACGACCTG
CCCGAGGAAG AGCGCCCGCA GGTTTTCGAG AAACTGGGCA ACAGCCTGGG AGCGCTGGGC
TTTCTCATCG ACATGCTGAG CTACCAGCGT GCCATGGCGC GCAAGCTCTT CGTTTACGAC
GAAGAGCTGG GCGAGTTGCG TGTCCTCATG GGGCGGGCGC GTGCGCAACT GCCTCATCCG
GGCGCGCATG ATCAGGAAGC GCCTGCCGTA CCCGCGTTGG AGCTCCCATT CCCCGACGCA
CCCGAACCCG CGGCGGCGGC TGTGGTCGAG AGCGCCACGC CGTCTGCACT GGCGGACATT
GATTTTTCGC TGCTTGACGT GGACGTGGCG ACGTCGGAAG GCGCCGTTTC GGCGGTGGTC
GCTCCGGAAG AGCCCGCGCT TCCAGTGGTT CCTTCGAGCA ACGTCGCTGC CGCAGCCCTG
CCGGAGGACG ATGGCGAGGA TGAACTGCTC GACATCTTCC TGGAAGAGGC GCGCGAAGTT
GTCGCCACCG GCTTGTCGGC CATCGACGCG CTGCGTGCTG CACCGGGTGA CCTGAGCGAG
CAGACCACGC TGCGGCGGGC CTTCCATACC CTCAAGGGTA GCTCGCGCAT GGTGGGACTG
AACGAATTTG GTGAAGCCGC GTGGTCCATG GAGCAGACGC TCAATGCCTG GCTGGCCGAG
CAAAAACCCA TCAAGGAAGC GCTGCTGCAA CTCTCCTCCG AGGCGTTGGG CGCCTTTGGT
CGATGGGCCG ATGACATCGC AGCAGGAGCT GCCGACCCGT GGAAGGCCGA AGCCTTCCGG
GTTGCGGCGG ATGCGATGCG CACGGATGGC ACGTTGCTGC CACTGGGCGT GCCCTCATCC
GATTCTGCGG ACACCACTGC GGCCTTGGCG CCGCAAGTGC CCGCAGAACC GCTGCTGCCT
GACGAGCCCG TGTTGTCGGT GCCAGACCTT CCGGAGCCCG CGGCCGAACC ACAAGCATTT
GCCATTGAAC CGCCTGCACC GCTCGAAGCG GTTGACGCCC ACGCCAACGC TGCCGCGCTG
GAGTTTGATC TGGTGCTGCC AGATGTCGAC GTGCCGTCTC AGGACGCGAC GGCGGGCCAT
GAGGAAGTGG GCGGCGACTT TGTCGACACC TTCATCGATG CGGATGAGGC CGACCAGGCC
GTGTTGCCGG TGGAGGAGGT GCCCGCAGCT CCCGAGACGG TGACGGAGGA GGTGGATTTC
TCCCTGTTCG AGGCTGCGCT GCAAGCCACC GATGCGCCAG CACAGGAGGT CGGCCAACCC
GCTTCAACAG TAGCGGCTGA CACGGTGGCG GAGCCGGCGG ATAACGCACC CGCGGTGCGG
CAGGACGAGA CATTCTTTAT CGGCACGGAT GACGTCCAAC CCGAGTTCAT CCTGGACGAG
GAGCCAGCGG CGGACGTACC GTCTGCGCAA GCCGCCGAAA CCGCGGCTGG GGTGGACGGT
CCGGTGGAGG AAGCGGTCGA CGAAGCGGTC AAGGTCATCG AGCACCTGCG CATCGGCATA
CCGCTGTACA ACGTGTACCT CAACGAGGCC GACGAATGGT CGCGCCGCCT CGTGACTGCG
TTGCAGGAAT GGTCGCTGGA ATTGCACCAG CCGCTGCCGG ACAGCGCGGT GGCGTTGGCG
CACTCGCTGG CAGGCAGCTC TGCCACTGTC GGGTTCTTGG CACTGTCCAA TCTTGCGCGT
ACCCTGGAAC ATACGCTGCA GCATGTTCAA CTGCTGCAGC AGGGTCTCCC CGAGCATGCG
CAGGCATTCA ACGCCGCTGC CGAGGACATC CGGAGGCTGC TGCACCAATT CGCCGCAGGC
TTCCTGAAGG AGCCCAGCGC CTCGGTGCTG GAACAGCTCA ACGAGATCCT GCAGACCGAA
GTGATCAGCG GCATGGTGTC GCTGGAAGAC CGTGCTTTCG CCGAGGCAGA GGCACAAGCA
TTTGAGACGC TGGAGCCGGC TCCGGCAACG CCTCAGGGCA CCGCGCATGC GACGACCGTC
GACGAGCCGA CTGCCCCATC GCCCGTGGTG GCGCCTACGC TCTCCGTAGG CCACGACCGC
GTGATTGGCG ATACTGTCGC GCCTGCCGTG TCGACCACCG TCGATATCGA TGACGACATC
GATGCGATGG ACAACATCGA CCCCGATCTG TTCCCCATTT TCGAGGAAGA AGCGGTTGAA
CTGCTGCCCA CGCTGGGTGG GGCGTTGCGC CAGTGGTCGT CCCGGCCGGA GAACCTGGGC
GCACGCAGCG AACTGCTGCG CGCCCTGCAC ACCCTCAAGG GCAGTGCGCG CCTGGCAGGC
GCGATGCGGC TTGGCGAAAT GGCGCACCGC ATGGAAACGG CCGTGGAGCA GATCGACACG
GAAACCGTGG CGGCCGCAGA CATTGAGCCC TTGCTGGTCA ACTTCGACGC ATTGCAGGCG
AGTTTCGACG CGCTGCGCGC AACTGGAGCG GAGCCGGCGG TACCGGCCGC TGAGCATGGA
CAGGACGCAC AGGTGGTCCA ATCCGCTCCC GCGCCAGGGC TTTCCCAGCC GCTCGCTCCG
CCCGTTGCGT TGCGTGCGCC GTTGGGTGCA GCCCCTGCGC CGGCCCCCCT GCGTGCGGCA
GGTGGGCATT CCGTGCGCGT GCGTTCGCAA CTGCTCGACC GGCTGGTGAA CCAGGCGGGC
GAAGTGATGA TCGCGCGTTC GCGGCTGGAC GTGCGCATGT CGCAACTGCG CAGTTCGCTG
ACCGATTTGT CGGGCAACTT GGAGCGCCTG CGCCAGCAGT TGCGTGACAT CGAGGTACAG
GCGGAATCGC AGATGCAGTC CCGCTTGGCA CTGTCCAAGG ACATGGCGGC GGGCTTCGAC
CCGCTGGAAT TCGACCGCTT CACCCGCGTT CAGGAACTGA CACGCATGAT GGCGGAGTCG
GTCAACGACG TGGCCACCGT GCAGCGCAAC ATGCAGCGTG CGATGGAAGA CGCCGAAGAC
GATCTGATCG CCCAGGGCCG CCAGGCACGT GAGTTGCAAC GCGATCTGCT GCGCACGCGC
ATGGTGGAGT TCGAGGGCAT CTCGGAACGC CTCTATGCGG TGGTGCGCCA GGCATCCAAG
GAAACCGGCA AGCAGATCAA GCTGGACATT TCGGGTGGTT CCATCGAGAT GGACCGCGGC
GTGCTGGACC GCATGACCCC TGCGTTCGAG CACCTGCTGC GCAACTGCGT GGGGCACGGC
ATCGAGGAAC CCGAGATGCG TGCCGCTGCC GGCAAGGCTC CTGTGGGTTC GATCTCCATC
GACTTGCGGC ACGAGGGCAA CGACGTGTCG GTGGCGTTCC GCGACGACGG GGCAGGCCTG
AACATCGCCC GCATCCGGGA CAAGGCCGTG GCGCAAGGGT TGATTGCCCC CGATGCGCAG
CTGAGCGATG GCGAGGCGGC CAACCTGATC TTCATGCCGG GCTTCTCCAC GGCGTCGGAG
ATCACGGGCC TTTCTGGCCG TGGTATCGGC ATGGACGTGG TGCGCTCGGA GGTGAATGCC
CTGGGTGGCC GCATCGAGAC CTCCACCGAG GCGGGCAAGG GAACGTCCTT CCGCATGGTG
CTGCCGCTCA CGACAGCGGT GACCCAGGTG GTGATGCTGC GCGCGGGCAA CCTGACCATC
GGCGTGCCAG CCAACCTGGT GGAGATCGTG CGCCGTAGTT CCGGCACGGA GCTCGACGCT
GCCTACGCCA GCCATACCAT CTCGGATGGC CTGGAGGATC TGCCCTTCTA CTGGGCGGGT
GCATTGCTCC AGTCGTCCTC GCGCAGCACG GAGGTCACGG GCAAGAGCCG CCCCGTGGTG
ATCCTGCGCA GCGCGTCTCA GCGCGTCGCG ATGCACGTGG ACGAAGTGCT GGGCAACCAG
GAAGTCGTGG TGAAGAACCT GGGGCCGCAG CTGTCGCGTC TGCCAGGCCT CGCGGGCATG
TCCGTGCTGG CTTCGGGCAC CGTGGTGCTG ATCTACAACC CGGTGGCGCT GGCCACGGTG
TACGGCGACC AAGTGCGCGC GGCCACGCAC GCACCGGCGG TGGACCAAGC CGGCGCGGTG
GTGGCTGCCG AGGGCGGCAC GCCCGCCGCT TCGCTGCTGG TGCCGGTGCA GCAGGTGCCG
TTGATCCTGG TGGTGGACGA CTCGATCACC GTGCGCCGCG TCACGCAGCG CCTGCTGCAG
CGCGAAGGCT ACCGCGTGGC CCTGGCGGCC GACGGCCTGC AGGCGCTGGA GCGCCTGCAG
GAAGAGCGCC CCGCGGTCGT GTTGTCCGAC ATCGAGATGC CGCGCATGGA CGGTTTTGAT
CTCGCGCGCA ACATCCGCTC CGACGCTGCG CTGCAGGACC TGCCGATCAT CATGATCACT
TCGCGCATTG CGCAGAAGCA CCGCGACCAT GCGATGGAAC TCGGCGTGAA CCACTACCTG
GGCAAGCCCT ACTCCGACGA GGAGCTGATG AGCCTGGTGC GCCACTACGC CAGCCTGAAC
ACGGAGGCAG TGACCGCCTG A
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| Protein sequence | MSSVDAANAQ GADWAQGEQD LGPLAWVLDE LRKSLDGAVK AMRRFVRDAE IARESDLASL
DAGPLRIARQ QLHQASGALE MVGMAPPALV LRAMETAVQR FVHRPETCSD DAAAVIERAS
FALIEYLEHV LAGKSVSPVA LFPQYREAQT LAGGERVHPA DLWPVERRFH DPDVPVAAAP
LPYGSEARAR LDSAVLRLVK NADPGAAADM QTTCLGFAAA QTDRQARAFW KICAGFFEAL
AQQALNPDLY AKRVASRVLM QYATLAKGDT AISDRLVQDL LFFCAQAVVP ATADAASRMP
VLTAVRRAFD LNRYQPVDYD QPRFGLFDPA ILAQARKRIA AATETWSALA GGDRNKLKPA
ADQFSLVCDS LRKLHPDSES LALALTRALE ATTRSGEPPS AALAMEVATS VLYLQASFEE
LDAAQQYMAE RAARLSERLD SVVAGGESQP LEPWMEELYR RVSDHQTMGS VVGELRATLA
EAEKSMDQFF RSPEDMTLLA SVPGSLQQMR GVLSVLGLDQ ASLAVVRMRD TVERMLTNDL
PEEERPQVFE KLGNSLGALG FLIDMLSYQR AMARKLFVYD EELGELRVLM GRARAQLPHP
GAHDQEAPAV PALELPFPDA PEPAAAAVVE SATPSALADI DFSLLDVDVA TSEGAVSAVV
APEEPALPVV PSSNVAAAAL PEDDGEDELL DIFLEEAREV VATGLSAIDA LRAAPGDLSE
QTTLRRAFHT LKGSSRMVGL NEFGEAAWSM EQTLNAWLAE QKPIKEALLQ LSSEALGAFG
RWADDIAAGA ADPWKAEAFR VAADAMRTDG TLLPLGVPSS DSADTTAALA PQVPAEPLLP
DEPVLSVPDL PEPAAEPQAF AIEPPAPLEA VDAHANAAAL EFDLVLPDVD VPSQDATAGH
EEVGGDFVDT FIDADEADQA VLPVEEVPAA PETVTEEVDF SLFEAALQAT DAPAQEVGQP
ASTVAADTVA EPADNAPAVR QDETFFIGTD DVQPEFILDE EPAADVPSAQ AAETAAGVDG
PVEEAVDEAV KVIEHLRIGI PLYNVYLNEA DEWSRRLVTA LQEWSLELHQ PLPDSAVALA
HSLAGSSATV GFLALSNLAR TLEHTLQHVQ LLQQGLPEHA QAFNAAAEDI RRLLHQFAAG
FLKEPSASVL EQLNEILQTE VISGMVSLED RAFAEAEAQA FETLEPAPAT PQGTAHATTV
DEPTAPSPVV APTLSVGHDR VIGDTVAPAV STTVDIDDDI DAMDNIDPDL FPIFEEEAVE
LLPTLGGALR QWSSRPENLG ARSELLRALH TLKGSARLAG AMRLGEMAHR METAVEQIDT
ETVAAADIEP LLVNFDALQA SFDALRATGA EPAVPAAEHG QDAQVVQSAP APGLSQPLAP
PVALRAPLGA APAPAPLRAA GGHSVRVRSQ LLDRLVNQAG EVMIARSRLD VRMSQLRSSL
TDLSGNLERL RQQLRDIEVQ AESQMQSRLA LSKDMAAGFD PLEFDRFTRV QELTRMMAES
VNDVATVQRN MQRAMEDAED DLIAQGRQAR ELQRDLLRTR MVEFEGISER LYAVVRQASK
ETGKQIKLDI SGGSIEMDRG VLDRMTPAFE HLLRNCVGHG IEEPEMRAAA GKAPVGSISI
DLRHEGNDVS VAFRDDGAGL NIARIRDKAV AQGLIAPDAQ LSDGEAANLI FMPGFSTASE
ITGLSGRGIG MDVVRSEVNA LGGRIETSTE AGKGTSFRMV LPLTTAVTQV VMLRAGNLTI
GVPANLVEIV RRSSGTELDA AYASHTISDG LEDLPFYWAG ALLQSSSRST EVTGKSRPVV
ILRSASQRVA MHVDEVLGNQ EVVVKNLGPQ LSRLPGLAGM SVLASGTVVL IYNPVALATV
YGDQVRAATH APAVDQAGAV VAAEGGTPAA SLLVPVQQVP LILVVDDSIT VRRVTQRLLQ
REGYRVALAA DGLQALERLQ EERPAVVLSD IEMPRMDGFD LARNIRSDAA LQDLPIIMIT
SRIAQKHRDH AMELGVNHYL GKPYSDEELM SLVRHYASLN TEAVTA
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