Gene Ajs_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3546 
Symbol 
ID4671280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3736759 
End bp3737751 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID639840578 
Producthypothetical protein 
Protein accessionYP_987735 
Protein GI121595839 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0909589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TTCATCACAC CACCCGCCGC ACGCTGCTGG CCTCCCTGGC CGTGGCTGCC 
GCCGGTGCGC TGCCCATGGG CGCCCTGGCG CAGAACTTCC CCACCAAGCC CATCACCATC
ATCGTGCCGT TCTCGGCCGG CGGCACCACC GACATCCTGG CGCGCATCGT GGGCCAGGGC
CTCACCACCG AGCTGGGCCA GTCCGTCGTG GTGGACAACA AGCCCGGAGC GGGCGGCAAC
ATTGGCGGAT CGCTGGCCGC CAAGGCCGCA GCCGACGGCT ACACCCTGTT CATGGGTACG
GTGGGCACGC ACGCCATCAA CCAGTCGCTG TACAAGAAGA TGCCCTTCGA CCCGGTGAAG
GACTTTGCGC CGCTGTCGCG CGTGGCCGCG GTGCCCAACC TGTTGGTGGC ACACCCCAGC
CAGCCGTTCA AGACCGTGAA GGAAATGATC GCCTACGCCA AGGCCAACCC CGGCAAGATC
ACGTTTGGCT CGCCCGGCAG CGGCGCGTCG CCCCACGTAT CGGGCGAGCT CTTCAAGAGC
ATGACCGGCA CCGACCTGCT GCACATCCCC TACAAGGGCA GCGCCCCCGC CATGACCGAC
CTGCTGGGCG GCCAGACCTC CGTCATGTTC GACAACATGC CCTCGGCCAT CCAGCACGTG
CGCTCGGGCA AGCTGCGCCC CATCGCCGTG ACCACCGCCA AGCGCTCGCC CGAGCTACCT
GACGTGCCGA CCATCGCCGA AGCCGGCGTG CCCGGCTACG AGGCAACCTC CTGGTTCGGC
ATGTTTGCCC CGGCCGGCAC GCCCAAGCCG GTGCTGGACA AGCTGCACGC CGCGCTGATC
AAGGTGCTGA ACCAGGCCGA CGTGAAGAAG AAGATCGCCG AGCAGGGCGG TGACGTGGTG
GCCGAGACTC CCGCGCAGTT TGCCGCCTTC ATCAAGGCCG AAAGCGTGAA GTGGGGCAAG
GTGGTGAAGG AGTCCGGCGC GACGGCCGAC TGA
 
Protein sequence
MTNLHHTTRR TLLASLAVAA AGALPMGALA QNFPTKPITI IVPFSAGGTT DILARIVGQG 
LTTELGQSVV VDNKPGAGGN IGGSLAAKAA ADGYTLFMGT VGTHAINQSL YKKMPFDPVK
DFAPLSRVAA VPNLLVAHPS QPFKTVKEMI AYAKANPGKI TFGSPGSGAS PHVSGELFKS
MTGTDLLHIP YKGSAPAMTD LLGGQTSVMF DNMPSAIQHV RSGKLRPIAV TTAKRSPELP
DVPTIAEAGV PGYEATSWFG MFAPAGTPKP VLDKLHAALI KVLNQADVKK KIAEQGGDVV
AETPAQFAAF IKAESVKWGK VVKESGATAD