Gene Ajs_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3539 
Symbol 
ID4671127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3730245 
End bp3731153 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID639840571 
Productbiotin synthesis protein BioC 
Protein accessionYP_987728 
Protein GI121595832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.662235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC ACCTTCCGCC CACCATCGAC CCGGTTGCCG CTGCACGCTG GCATGCCATG 
GTGCCCGAGG TCTCGCCCTG GTTGCACGAA GAGGTGGCGC AGCGCATGCA GGAGCGGCTG
CAGTGGATCG TGCAGGCGCC GCAGGCCTGG TGCGACTGGG ATCCGCTGCG CGGCGGCGTG
CAGGGCCATG GCCTGGTGGG CCAGCATTTC GAACAAGCCG CCAGCCATAT CACCGAGACT
TCATCGCCCG CGGGGGAGGC GCTGGCGCGC GTGCGCTTCG CAAAGCCCTG GTGGAGCCCC
GCGCGCTGGT CCGCGGCGGC GCCGCGCTTC GGGGTGCCGC CCGAGGGCAG CGTACAGATG
CTGTGGTCCA ACATGGCCCT GCACATGGCA GCGGACCCGC AGGCGCTGAT CACCCAGTGG
CATCGGGCAC TGGCGGTGGA CGGTTATCTG ATGTTCTCGT GCCTGGGCCC TGACACGCTG
CGCGAGCTGC ACGCGCTGTA TGCCGAGCTG GGCTGGCCCG CCGCCGGCCA CGCCATGACC
GACATGCACG ACTGGGGCGA CATGCTGGTG CATGCGGGGT TTGCCGAGCC TGTCATGGAC
ATGGAACGCA TCACGCTCAC CTTTGCCACG CCCGAGCGGC TGCTGCAGGA GCTGCGCGGC
CTGGGGCGCA ACCTGCATCC GCAGCGCTTT CCCGCGTTGC GCGGGCGCCA CTGGCGCCAG
CGACTGGAAC AGGCGCTGGC CCAGCGGCTG GCCGATCCTC GCCATGAGGG GCAGCTTGCA
TTGACCTTCG AGGTCGTCTA CGGCCATGCC TTCAAGCCCG CGCCCCGCGT GCGCGTGGAG
GGCAGCAGCG CGGTGTCGCT GCAGGACATG CGCGCCATGC TCCACGCAGG ACGCACGCTG
CCGCGCTGA
 
Protein sequence
MSEHLPPTID PVAAARWHAM VPEVSPWLHE EVAQRMQERL QWIVQAPQAW CDWDPLRGGV 
QGHGLVGQHF EQAASHITET SSPAGEALAR VRFAKPWWSP ARWSAAAPRF GVPPEGSVQM
LWSNMALHMA ADPQALITQW HRALAVDGYL MFSCLGPDTL RELHALYAEL GWPAAGHAMT
DMHDWGDMLV HAGFAEPVMD MERITLTFAT PERLLQELRG LGRNLHPQRF PALRGRHWRQ
RLEQALAQRL ADPRHEGQLA LTFEVVYGHA FKPAPRVRVE GSSAVSLQDM RAMLHAGRTL
PR