| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3522 |
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| Symbol | |
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| ID | 4670594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3715281 |
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| End bp | 3716246 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639840554 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_987711 |
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| Protein GI | 121595815 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTGCA TGGAAGAAAG GACTACCGAT ATGGCACTCC AGACTGCAAC CTCCGTGACG
ACCCTCGCGC CCGCGAACCC GTGGGCGCTG GTTCCCCCGC TGGGCAACCT GGACGCCTAT
ATCTCCGCCG TCAACCGCCT TCCCCTGCTC ACGCAGGAGG AGGAGCAGCG CTACGCGCGC
CAGCTCAAGG ATGACAACAA TGTCGAGGCG GCCGGCCGCC TGGTGCTGTC GCACCTGCGC
CTGGTCGTGT CCATCTCGCG CCAGTACCTG GGTTACGGCC TGCCGCATGG CGATCTGATC
CAGGAAGGCA ACGTGGGCCT GATGAAGGCC GTCAAGCGCT TTGACCCTGA CCAGGGCGTT
CGCCTGGTGA GCTACGCCAT GCATTGGATC AAGGCCGAGA TCCACGAGTA CATCCTGAAG
AACTGGCGCA TGGTCAAGGT GGCAACGACC AAGGCGCAGC GCAAGCTGTT CTTCAACCTG
CGCTCCATGA AGCAGGGCTT CAAGGCCGAC GCGCTGGACG CCGACACGCA CCGCGAAACC
TTATCCGACC ACGAGATCGA CCTGGTGGCC GAGCAGCTCA ACGTGAAGCG CGAGGAAGTC
ATCGAGATGG AAACGCGCCT GTCCGGTGGC GACGTGCTGC TGGACCCCGC TCCCAGCGAC
GACGGCGAGC AGGCCTTTGG CCCCATCGCC TACCTCGCCG ACGCGGGCCA TGAGCCCACC
GCCTTGATCG AATCGCGCCA GCGTGACGCG CTGGCCACGG ACGGTATTGC CACCGCCCTG
GACAGCCTGG ACGCACGCAG CCGCCGTATC GTGGAGCAGC GCTGGCTGCA GGTGAACGAC
GATGGCTCGG GCGGCATGAC ACTGCACGAG TTGGCGACCG AGTACGGCGT GAGCGCGGAG
CGCATCCGCC AGATCGAGGT GGCCGCCATG AAAAAGATGA AGAAGGCCCT GGCCGAATAC
GCCTGA
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| Protein sequence | MICMEERTTD MALQTATSVT TLAPANPWAL VPPLGNLDAY ISAVNRLPLL TQEEEQRYAR
QLKDDNNVEA AGRLVLSHLR LVVSISRQYL GYGLPHGDLI QEGNVGLMKA VKRFDPDQGV
RLVSYAMHWI KAEIHEYILK NWRMVKVATT KAQRKLFFNL RSMKQGFKAD ALDADTHRET
LSDHEIDLVA EQLNVKREEV IEMETRLSGG DVLLDPAPSD DGEQAFGPIA YLADAGHEPT
ALIESRQRDA LATDGIATAL DSLDARSRRI VEQRWLQVND DGSGGMTLHE LATEYGVSAE
RIRQIEVAAM KKMKKALAEY A
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