| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3489 |
|---|
| Symbol | |
|---|
| ID | 4673294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3686667 |
|---|
| End bp | 3687353 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639840521 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_987678 |
|---|
| Protein GI | 121595782 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.113853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCC GCACCGCACA CACTTTGCAC GCCCAATCGT CTCTTTCCGC ACTCGCGCCC
GCTGGCGCGG CGCACGTTCC CTCTTCCAAC GCCACCCTGC GCCACGGCCC GTTCGAGGAC
GCCCAGGCGC TGTTCGCCGG CTCGCTGTTC GTCGGGCTGG CCATGCTCAT GTACGCCCAG
GCCGGGCTGC TCACGGGCAG CACGGCGGGG CTGGCGTTCG TGCTGCACTA CGCCACGGGC
TGGTCGTTCG GCGCGGTGTA CTTTCTCATC AACCTGCCGT TCTACTGGTT TGCCTGGCGC
CACCTGGGGC GCGCCTTCAC GCTCAAGACC TTCGTCTGCG TGGCCATGCT GTCGCTGGTG
ATGGTGCTGG CGCCGAACGT GTTCCACATC GACTACCTGC ACCCGGCGTT CGCCGCGGTG
GCCGGAGGGT TGCTGATGGG CACGGGCGTG CTGTTCCTGG CGCGCCACCA GTCCAGCCTG
GGCGGCGCGA CCATCGTGTC GCTTTACGCG CAGCAGCGCC ACGGCATCCG GGCTGGCAAG
GTGCAGTTGG GCATCGACTG CTGCGTGGTG CTGCTGGCGC TGTGCGTGGT GCCATGGCAG
CGCGTGGCCT GGTCGGTGCT CGCCACGGTG GTGATGTGCG TGTTCCTGTG GGTGAGCCAC
CGGCCGGGAC GCTACCAGGG CGGTTGA
|
|---|
| Protein sequence | MASRTAHTLH AQSSLSALAP AGAAHVPSSN ATLRHGPFED AQALFAGSLF VGLAMLMYAQ
AGLLTGSTAG LAFVLHYATG WSFGAVYFLI NLPFYWFAWR HLGRAFTLKT FVCVAMLSLV
MVLAPNVFHI DYLHPAFAAV AGGLLMGTGV LFLARHQSSL GGATIVSLYA QQRHGIRAGK
VQLGIDCCVV LLALCVVPWQ RVAWSVLATV VMCVFLWVSH RPGRYQGG
|
|---|
| |