| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3442 |
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| Symbol | |
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| ID | 4674360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3636367 |
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| End bp | 3637131 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639840476 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_987633 |
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| Protein GI | 121595737 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGC AAAGTAAGTC CTTGTCCGCG CCTTGCAAAG GCTGCCAGGA TCGTCCGCCG
CTCGATCTGG CTTTCAGCAT GGCTTTTCAG CCGATCGTGG ACGTCCGCAG CCAAGCAGTG
TTCGCCTATG AAGCCCTGGT GCGTGGCCTG GATGGCAGTA GCGCCAGCCA GATCCTTAGC
CAGGTGAACG ACGACAACCG CTATCAATTT GACCAGGCCT GCCGCGTCAA GGCTGTGAGC
TTGGCCGCGC GCCTGGGCAT TGCCTGCCAC GTCAGTATCA ATTTTCTGCC GAATGCCGTA
TACGAACCCG CCGCTTGTAT CCGTACGACT CTGGAGGCAG CGCAGCAGCA CCAGTTTCCG
ACCAGTCGGC TGATTTTCGA AATCACCGAA AACGAGCGCG TGGTCGATAA AGAACACCTC
AAGAGCATCG TGCAAGAGTA CCGGCGGCGT GGCTTCAAGA CAGCCATCGA CGATTTCGGT
GCTGGTTATT CCGGCCTCAA CCTGCTGGCC GAGTTCCAGC CCGACATCAT CAAGCTGGAC
ATGGAATTGG TGCGCCACAT TGACAGCAAT CCTGTGCGCC GAGCCATCGT GCAGGGCATT
CTGGGGGTGT GCCAGGCACT GTCCATCGAT GTAATCGCAG AGGGCGTGGA GGACGAGGCC
GAATATCGAA CGCTGCGAGC GCTGGGCGTT CACTATTTCC AGGGCTACTT GTTTGCCAAA
CCTGCTTTCG AGCAACTACC CGAGGTTGAT TGGCGCGCGG ACTGA
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| Protein sequence | MLLQSKSLSA PCKGCQDRPP LDLAFSMAFQ PIVDVRSQAV FAYEALVRGL DGSSASQILS
QVNDDNRYQF DQACRVKAVS LAARLGIACH VSINFLPNAV YEPAACIRTT LEAAQQHQFP
TSRLIFEITE NERVVDKEHL KSIVQEYRRR GFKTAIDDFG AGYSGLNLLA EFQPDIIKLD
MELVRHIDSN PVRRAIVQGI LGVCQALSID VIAEGVEDEA EYRTLRALGV HYFQGYLFAK
PAFEQLPEVD WRAD
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