| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3401 |
|---|
| Symbol | |
|---|
| ID | 4674067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3590971 |
|---|
| End bp | 3592641 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639840439 |
|---|
| Product | Na/Pi-cotransporter II-related protein |
|---|
| Protein accession | YP_987597 |
|---|
| Protein GI | 121595701 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1283] Na+/phosphate symporter |
|---|
| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter
[TIGR01013] Phosphate:Na+ Symporter (PNaS) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.161334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC TGCTGAATCT GCTGGCCGCC ATTGCCCTGC TGGTCTGGGG CACGCACCTC
GTGCGCACCG GCGTGCTGCG CGTGTTCGGC GCCAATCTGC GCACCATGCT GGCGCGCAGC
ATGGGCAACC GCTTCTCCGC CGCGCTCTCG GGCATGGGTG TGACGGCGCT GGTGCAGTCC
AGCACCGCCA CCTCGCTCAT GACCTCGTCC TTCGTGGGCC AGGGGCTGAT CACGCTGCCC
GCGGCGCTGG CCGTGATGCG CGGCGCCGAC GTAGGCACCG CGCTCATGTC CGTGCTGTTC
TCGCTGGACC TGTCGTGGCT GTCGCCGCTA TTCATCTTCG TGGGCGTGGT GCTGTTCATC
GCGCGCCAGG CCGGTACCGC CGGGCGCGTG GGGCGCGTGC TGATCGGCCT GGGGCTGATG
CTGCTGGCGC TGGAGATGGT GATGCAGGCC AGCGGCCCCA TGCTGGCCTC GCCCGTCATC
AAGATGGTGC TGGGCTCGGT GCGCAGCGAC ATTGCGCTGG AGATCATCCT GGGCACGGTG
CTGGCCGTGC TGGCCTACTC CAGCCTCGCC ATCGTGCTGC TGATCGCGGC CATGGCCGCC
TCGCACGTGG TGCCGCTGGA CGTGGCCCTG GGCCTGGTGC TGGGCGCCAA CCTGGGCAGC
GGCCTGGTGG CGGTACTGAC CACCGCCAAG TCGGCCGTGG AGGTGCGCCA GGTGACCGTG
GGCAACCTGG TGTTCAAGGT CATGGGCGTG CTGCTGGTGG CCCCGTTCAT CGGGCTGTGG
CTGCGGCACC TGCAGCCGCA CATGCCCGGC ACGGCCCAGG GCGTGGTGCT GTTCCACCTG
GCCTACAACA TCCTCATCAG CGTGGGCTTC ATCGGCTTCA CGCAATGGGT GGCGCGCGCC
GTGGCGTGGC TGCTGCCCAA GCCCGAAAGC GCGCAGCGCC GCCGCCCGCA GCACCTGGAC
CCGTCCGCGC TGTCCACGCC CTCGCTGGCC ATCTCCTGCG CGGCGCGCGA GGCCCTGTAC
CAGGCCGACG TGGTGGAGAC CATGTTGCTG GGCGTGCTGC AGGTCATACG CCACAACGAC
CAGGACCTGG CCGAACGCCT GCGCAAGATG GACGACGAGG TGGACGAGCT GTACTCCGCG
ATCAAGTACT ACCTGACGAA GATCTCGCGC GAGGCCCTGG GCGAGGAGGA AAGCCGCCGC
TGGGCCGACA TCATCAGCTT CACCATCAAC ATGGAGCAGG TGGGCGACAT CATCGAGCGC
GTGCTGCAGG ACATCGAGGA CAAGAAGATC CGCAAGGGCC GCGACTTCTC CGAGGCCGGC
ATGGCCGAGA TCACCGAACT GCACCAGCGC CTGATAGACA ACCTGCGTCT GGGCATGAGC
GTGTTCCTGA ACGGCAACCT GCGCGACGCG CAGCGCCTGC TGGAGGAGAA GGTGCGCTTT
CGCGACCTGG AGCGCGCCTA CGCCGCCAGC CACCTGCTAC GGCTGTCGGA CGGCACGGTG
CCGGCCATGG AGACCAGCTC GCTGCACATC GACCTGATCA GCGACCTCAA GCGCATCAAC
TCGCACATCT GCTCCATCGC CTACCCCATC CTGGAGTCGG CCGGCGCGCT GGCCCCCAGC
CGCCTCAAGG CCCTGCGCGC GGCGCCCGCG CCGCTGAACG ATCACCCCTG A
|
|---|
| Protein sequence | MKHLLNLLAA IALLVWGTHL VRTGVLRVFG ANLRTMLARS MGNRFSAALS GMGVTALVQS
STATSLMTSS FVGQGLITLP AALAVMRGAD VGTALMSVLF SLDLSWLSPL FIFVGVVLFI
ARQAGTAGRV GRVLIGLGLM LLALEMVMQA SGPMLASPVI KMVLGSVRSD IALEIILGTV
LAVLAYSSLA IVLLIAAMAA SHVVPLDVAL GLVLGANLGS GLVAVLTTAK SAVEVRQVTV
GNLVFKVMGV LLVAPFIGLW LRHLQPHMPG TAQGVVLFHL AYNILISVGF IGFTQWVARA
VAWLLPKPES AQRRRPQHLD PSALSTPSLA ISCAAREALY QADVVETMLL GVLQVIRHND
QDLAERLRKM DDEVDELYSA IKYYLTKISR EALGEEESRR WADIISFTIN MEQVGDIIER
VLQDIEDKKI RKGRDFSEAG MAEITELHQR LIDNLRLGMS VFLNGNLRDA QRLLEEKVRF
RDLERAYAAS HLLRLSDGTV PAMETSSLHI DLISDLKRIN SHICSIAYPI LESAGALAPS
RLKALRAAPA PLNDHP
|
|---|
| |