Gene Ajs_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3388 
Symbol 
ID4673855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3575969 
End bp3577906 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content72% 
IMG OID639840426 
Productpeptidase M48, Ste24p 
Protein accessionYP_987584 
Protein GI121595688 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.247321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGG CGGACTTCAT ACACATGGTG CGCATGAGCG AGATGGCCAG CGCCGACGAC 
AGCCGTGCCT ACCGCCGCGG CGTGGCCGCC TTTGCGGCGC TGGGCTACGC CTGGGTGCTG
GGCTGCCTGG CGCTGGCTGT GGGCATGCTG GTGTGGGTGG TGCCCCAACT CCTCCACGGC
AGGTTCCGCT TCGCCTGGGT ATGGATTGTG ATGGCCGCGT GCGGCCTGTT ATGGCTGAGC
CTGCGTGCGC TGTGGGTGCC GCGCAGCCCG CCCCACGGCG TACAGATCAC CGCGCGTGAG
GCGCCGGCGC TGTTCGATGC GCTGGAGCGC ATCCGCCGCA AGATCAAGGG GCCGCCCATC
CACGAGGTGT ATCTGGACGA CGACTTCAAC GCCAGCATCC GCCAGGAGCC TCGCTGGGGT
GTGCTGGGCG GTGCGCGCAA TCAGCTCACG CTCGGTCTGC CGCTGCTCAT GGCGCTGGAC
AAAAAGCGCC TGCTGGCGGT GCTGGCCCAC GAATACGGCC ACCTGCGTGG CGACCACGGT
CGCTTTGCGG CCTGGATCTA CCGCACCCGC CTGAGCTGGC ACCGCCTGCA CGAGGGCATG
CAGGACGATG CCGGCCCCAT GGCCGTGGCC ACGCGGGCGT TCCTGGACTG GTACTGGCCG
CGCTTTGCCG CCAAGACCTT CGCCCTGGCC CGCCAGGACG AATACGAGGC CGACCGCATC
GCCGCGCGCC TGCTGGGCCA GGATGAGGTG GCCGCCGCGC TCACCGAGGT CGAGATCAAG
GGCGCCTGGC TGGGCGAGCA GTTCTGGCGC CAGCACTGGC AGGGCGCGCT GTCCCAACCG
CTGCCCGCCG GGCCCTACGG CGCCCTGCAG CGCCTGCTGG CACTGCCGCC GGAGCCGGCC
TTCGCCCAGA CGGCGCTGCG CGACGCGGTA CGGCGCCTGA GCGGCGTGGA TGACACCCAT
CCCGTGCTGC GCGACCGGGT GGAGGCGCTC ACGGGTGGGC GCCCCACGCT GCCGCCGTGG
TCGCAGCGCG GGGCGCTGTC GCTGCTGGGG GCGCAGGCGC GCGGCTGGCT GGCGCACTTC
GATGACCAGT GGTGCAAGGC CAACGCCACG GTGTGGAAGC AGCACCACGC CCGCCTGCAG
CGGGCGCAAG AGCGCGTGCG CACCCTGCAG TCCACCCAGG CCGGCAACAG CGCCACCGAG
ACCGTGGAGC TGGCGCGGTT GATGCGCCGG CTGGACCCGC AGGCCGCCGT GCAGCCGCTG
TACGAGCGCG TGCTGGCGCG CGAACCCGCC CATGTGGGTG CGCTGCTCGG GCTGGCCGAC
AGCCTGGCGC CACAGGACGT GGCAGGGCGC CTGCGCTGCT GTGAGGCGTT GTGGGACTGC
AGTCCCACCC ATCGCTGGGG TGCGGCCCGG AAAGCGTTTC GGAAGGCCGC GGCAAAGCCA
GACTGCAGTC CCACCCATCG CTGGGGTGCG GCCCGGGGCG CGGTGCAGGC GCTGGAGCAG
CGTGCCGAGG CCGGTGGGGA CTATGACGCC GAGGCCCTCA AGCGCTGGCG CGAGCGCGTG
CGCCAGGCGG AGGAGGTGGA GGATGCCGCC CTGGAGGAGC TGTACGACAC GCCCTTCTTC
CAGCGCGTGA CGCGCCACGA TCTGAGCGCG TTTGAGCTCG GCGAGCTGCA GGCCGAATTG
GCCCTGCACC GCGCGGTGGC GCGCGCCTGG CTGGTGTGCA AGCAACTGCG CGCCATGCCC
CAGCGGCGCA CCTACCTGCT GTTCGTGCAA TTGCGCGGTC TGGATGCGCA GGCGCGCTAT
GCCCTGTGCC GCCGTCTGGA GAGCGAGCTG GAACTGCCGG GACAGGTGCT GGTGCTCGCG
GCCGGTGACG CGGCGGCGCT GGAGGACATC GAGCGCCAGG CGTTCGAACC CGTGCACGCC
GGGCCCGGAG GGGCTTGA
 
Protein sequence
MEKADFIHMV RMSEMASADD SRAYRRGVAA FAALGYAWVL GCLALAVGML VWVVPQLLHG 
RFRFAWVWIV MAACGLLWLS LRALWVPRSP PHGVQITARE APALFDALER IRRKIKGPPI
HEVYLDDDFN ASIRQEPRWG VLGGARNQLT LGLPLLMALD KKRLLAVLAH EYGHLRGDHG
RFAAWIYRTR LSWHRLHEGM QDDAGPMAVA TRAFLDWYWP RFAAKTFALA RQDEYEADRI
AARLLGQDEV AAALTEVEIK GAWLGEQFWR QHWQGALSQP LPAGPYGALQ RLLALPPEPA
FAQTALRDAV RRLSGVDDTH PVLRDRVEAL TGGRPTLPPW SQRGALSLLG AQARGWLAHF
DDQWCKANAT VWKQHHARLQ RAQERVRTLQ STQAGNSATE TVELARLMRR LDPQAAVQPL
YERVLAREPA HVGALLGLAD SLAPQDVAGR LRCCEALWDC SPTHRWGAAR KAFRKAAAKP
DCSPTHRWGA ARGAVQALEQ RAEAGGDYDA EALKRWRERV RQAEEVEDAA LEELYDTPFF
QRVTRHDLSA FELGELQAEL ALHRAVARAW LVCKQLRAMP QRRTYLLFVQ LRGLDAQARY
ALCRRLESEL ELPGQVLVLA AGDAAALEDI ERQAFEPVHA GPGGA