Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3388 |
Symbol | |
ID | 4673855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3575969 |
End bp | 3577906 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639840426 |
Product | peptidase M48, Ste24p |
Protein accession | YP_987584 |
Protein GI | 121595688 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.247321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGG CGGACTTCAT ACACATGGTG CGCATGAGCG AGATGGCCAG CGCCGACGAC AGCCGTGCCT ACCGCCGCGG CGTGGCCGCC TTTGCGGCGC TGGGCTACGC CTGGGTGCTG GGCTGCCTGG CGCTGGCTGT GGGCATGCTG GTGTGGGTGG TGCCCCAACT CCTCCACGGC AGGTTCCGCT TCGCCTGGGT ATGGATTGTG ATGGCCGCGT GCGGCCTGTT ATGGCTGAGC CTGCGTGCGC TGTGGGTGCC GCGCAGCCCG CCCCACGGCG TACAGATCAC CGCGCGTGAG GCGCCGGCGC TGTTCGATGC GCTGGAGCGC ATCCGCCGCA AGATCAAGGG GCCGCCCATC CACGAGGTGT ATCTGGACGA CGACTTCAAC GCCAGCATCC GCCAGGAGCC TCGCTGGGGT GTGCTGGGCG GTGCGCGCAA TCAGCTCACG CTCGGTCTGC CGCTGCTCAT GGCGCTGGAC AAAAAGCGCC TGCTGGCGGT GCTGGCCCAC GAATACGGCC ACCTGCGTGG CGACCACGGT CGCTTTGCGG CCTGGATCTA CCGCACCCGC CTGAGCTGGC ACCGCCTGCA CGAGGGCATG CAGGACGATG CCGGCCCCAT GGCCGTGGCC ACGCGGGCGT TCCTGGACTG GTACTGGCCG CGCTTTGCCG CCAAGACCTT CGCCCTGGCC CGCCAGGACG AATACGAGGC CGACCGCATC GCCGCGCGCC TGCTGGGCCA GGATGAGGTG GCCGCCGCGC TCACCGAGGT CGAGATCAAG GGCGCCTGGC TGGGCGAGCA GTTCTGGCGC CAGCACTGGC AGGGCGCGCT GTCCCAACCG CTGCCCGCCG GGCCCTACGG CGCCCTGCAG CGCCTGCTGG CACTGCCGCC GGAGCCGGCC TTCGCCCAGA CGGCGCTGCG CGACGCGGTA CGGCGCCTGA GCGGCGTGGA TGACACCCAT CCCGTGCTGC GCGACCGGGT GGAGGCGCTC ACGGGTGGGC GCCCCACGCT GCCGCCGTGG TCGCAGCGCG GGGCGCTGTC GCTGCTGGGG GCGCAGGCGC GCGGCTGGCT GGCGCACTTC GATGACCAGT GGTGCAAGGC CAACGCCACG GTGTGGAAGC AGCACCACGC CCGCCTGCAG CGGGCGCAAG AGCGCGTGCG CACCCTGCAG TCCACCCAGG CCGGCAACAG CGCCACCGAG ACCGTGGAGC TGGCGCGGTT GATGCGCCGG CTGGACCCGC AGGCCGCCGT GCAGCCGCTG TACGAGCGCG TGCTGGCGCG CGAACCCGCC CATGTGGGTG CGCTGCTCGG GCTGGCCGAC AGCCTGGCGC CACAGGACGT GGCAGGGCGC CTGCGCTGCT GTGAGGCGTT GTGGGACTGC AGTCCCACCC ATCGCTGGGG TGCGGCCCGG AAAGCGTTTC GGAAGGCCGC GGCAAAGCCA GACTGCAGTC CCACCCATCG CTGGGGTGCG GCCCGGGGCG CGGTGCAGGC GCTGGAGCAG CGTGCCGAGG CCGGTGGGGA CTATGACGCC GAGGCCCTCA AGCGCTGGCG CGAGCGCGTG CGCCAGGCGG AGGAGGTGGA GGATGCCGCC CTGGAGGAGC TGTACGACAC GCCCTTCTTC CAGCGCGTGA CGCGCCACGA TCTGAGCGCG TTTGAGCTCG GCGAGCTGCA GGCCGAATTG GCCCTGCACC GCGCGGTGGC GCGCGCCTGG CTGGTGTGCA AGCAACTGCG CGCCATGCCC CAGCGGCGCA CCTACCTGCT GTTCGTGCAA TTGCGCGGTC TGGATGCGCA GGCGCGCTAT GCCCTGTGCC GCCGTCTGGA GAGCGAGCTG GAACTGCCGG GACAGGTGCT GGTGCTCGCG GCCGGTGACG CGGCGGCGCT GGAGGACATC GAGCGCCAGG CGTTCGAACC CGTGCACGCC GGGCCCGGAG GGGCTTGA
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Protein sequence | MEKADFIHMV RMSEMASADD SRAYRRGVAA FAALGYAWVL GCLALAVGML VWVVPQLLHG RFRFAWVWIV MAACGLLWLS LRALWVPRSP PHGVQITARE APALFDALER IRRKIKGPPI HEVYLDDDFN ASIRQEPRWG VLGGARNQLT LGLPLLMALD KKRLLAVLAH EYGHLRGDHG RFAAWIYRTR LSWHRLHEGM QDDAGPMAVA TRAFLDWYWP RFAAKTFALA RQDEYEADRI AARLLGQDEV AAALTEVEIK GAWLGEQFWR QHWQGALSQP LPAGPYGALQ RLLALPPEPA FAQTALRDAV RRLSGVDDTH PVLRDRVEAL TGGRPTLPPW SQRGALSLLG AQARGWLAHF DDQWCKANAT VWKQHHARLQ RAQERVRTLQ STQAGNSATE TVELARLMRR LDPQAAVQPL YERVLAREPA HVGALLGLAD SLAPQDVAGR LRCCEALWDC SPTHRWGAAR KAFRKAAAKP DCSPTHRWGA ARGAVQALEQ RAEAGGDYDA EALKRWRERV RQAEEVEDAA LEELYDTPFF QRVTRHDLSA FELGELQAEL ALHRAVARAW LVCKQLRAMP QRRTYLLFVQ LRGLDAQARY ALCRRLESEL ELPGQVLVLA AGDAAALEDI ERQAFEPVHA GPGGA
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