Gene Ajs_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3377 
Symbol 
ID4673363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3563865 
End bp3565091 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID639840415 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_987573 
Protein GI121595677 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.465858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGA CCCCGATGCA CAAGCGCGTC ATTGCGCTGG ACGTTCACCA GGCCAAGATC 
ACGGCCTGCG CCGTTGTCGA ACATGACGAT GGCCGGGTAG AGGTCACCAA GCGAGACTTC
GGCGCCTTCA AACGCGACCG CCGCGCCTTG GCGCAGTGGG CGCTGGAGAT GGCCCCTGAG
GTCGTGGTGA TGGAGAGCAC AGGGGTGTAT TGGAAAAGCC CGTTTGCGGC GCTGGAGGCG
GTGGGCCTTA TTGCTTGGGT GGTCAACGCG CGGCATGTCA AGGCTGTGCC CGGTCGCAAG
ACCGACATGG CCGATGCACA GTGGCTGGCC ACGCTGGCGC GTGCGGGTTT GCTGCGCGCC
TCGTTCATTC CACCGGTGCA GATGCGCCAG CTTCGCCTGG TAGCGCGCCA GCGGCAAAAG
CTGGTGGGCA TGTGCAGCGC CGAGAAGAAC CGGCTGCACA AGGTGCTGGT GGACGCGGGC
ATTCGCATCA ACGTGCTGGT GGCCGACATC CACGGACAGA GCGCGCGTGC CATGGTCAAA
GCCCTGATCG AGGGACAGCC CATGCACGAG GTGCTGAACC ACAAGGGGCG GCTGCGAGCG
AGCAGGCAAG AACTGTGCGA GGCCCTGAGC ACCGAGCAGT TCAGCGCAGT GCACCGCTTT
GTGGCCCAGG AGATCGTGCA GCACATTGAG CAGATCGAGC AGCGCATCGC CCGCATGGAC
CAGTACCTGC TGCAGGGCCT GCAACCCTGG CAGCCACAGC TCAGGCTGCT GCAGACCCTG
CCGGGCATCG ACGAGCAGGG GGCGGCCATG CTGCTGGTGG AGATTGGTGC GGACATGAGC
GTGTTTGGCA GTGCAGAGCG CCTGGCCAGT TGGGTGGGCA TCTGCCCAGG CAACAACGAG
AGCGCGGGCA AGCGCAAAAC CGGGCGCATC CGCAAGGGCA ACGCCTGGGT CAGAAGGCTG
CTGTGCGAGT TCGCCCAGGC TGCAGCACGA ACGCGCTGCG CACTCAAGGC CAAGTTCGAC
GCGCTGACCA TCCGAAAGGG CCACAAGAAG TCAGTGGTGG CGCTGGCCCA CAAGATGCTG
CGCACCATCT ACGCCATGCT CAGCAACGCA AGCCACTACC AGGACAAGGA GGTCGATTAC
GAGGCGCTGA ACGTTCAGCG CAACGCGCCG CGCTGGATCA AAATGCTGCG CAAGCACGGC
TTCATCGCCA CGCCCGCTGC CGCCTGA
 
Protein sequence
MDLTPMHKRV IALDVHQAKI TACAVVEHDD GRVEVTKRDF GAFKRDRRAL AQWALEMAPE 
VVVMESTGVY WKSPFAALEA VGLIAWVVNA RHVKAVPGRK TDMADAQWLA TLARAGLLRA
SFIPPVQMRQ LRLVARQRQK LVGMCSAEKN RLHKVLVDAG IRINVLVADI HGQSARAMVK
ALIEGQPMHE VLNHKGRLRA SRQELCEALS TEQFSAVHRF VAQEIVQHIE QIEQRIARMD
QYLLQGLQPW QPQLRLLQTL PGIDEQGAAM LLVEIGADMS VFGSAERLAS WVGICPGNNE
SAGKRKTGRI RKGNAWVRRL LCEFAQAAAR TRCALKAKFD ALTIRKGHKK SVVALAHKML
RTIYAMLSNA SHYQDKEVDY EALNVQRNAP RWIKMLRKHG FIATPAAA