Gene Ajs_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3356 
Symbol 
ID4672369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3547065 
End bp3547586 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID639840396 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_987554 
Protein GI121595658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.378643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCA TCCGCGCCAG CCGGGACGAA GACGTCGCCG CCATCACCGC CATCTACACC 
CACCATGTGC TGCACGGCAC GGGCACCTTC GAGATCGACC CGCCCACGGC GCTGGACATG
GCGGCGCGGC GCGCGGATGT GCTGGCCAAG GGCCTGCCCT ACCTGGTGGC TGAAGAAGCA
GGCCAGGTCC TGGGCTTTGC CTACTGCAAC TGGTTCAAGC CCCGCCCTGC CTACCGTTTC
TCGGCCGAGG ATTCGATCTA CATCGCCGAT GCGGCGCGCG GCCGGGGCCT GGGACGGCAG
TTGCTGGAGG CCCTCGCCGT GCAGGCAGAG GCCGCCGGCG TGCGCAAACT CCTGGCGGTG
ATCGGCGACT CGGCCAATGC GGGTTCCATC GGCGTGCACC GGGCCGCAGG TTTCACCGAC
GTGGGCGTGA TGCGCTCCGT GGGCTGGAAG TTCGGCGCCT GGCGCGACAT CGTGCTCATG
GAAAAGCCCC TGGGCGCGGG CGATACCACC GCCCCCGAAT GA
 
Protein sequence
MPLIRASRDE DVAAITAIYT HHVLHGTGTF EIDPPTALDM AARRADVLAK GLPYLVAEEA 
GQVLGFAYCN WFKPRPAYRF SAEDSIYIAD AARGRGLGRQ LLEALAVQAE AAGVRKLLAV
IGDSANAGSI GVHRAAGFTD VGVMRSVGWK FGAWRDIVLM EKPLGAGDTT APE