| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3280 |
|---|
| Symbol | |
|---|
| ID | 4674578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3464402 |
|---|
| End bp | 3465379 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639840320 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_987479 |
|---|
| Protein GI | 121595583 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.577877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCT ATTCACGCAT TACCGGCACC GGCAGCTATT TGCCGCCGCA CCGGGTAACC
AATGATGACC TGGTGGCCCA GCTGGCGCAG CAGGGCATCG AGACCTCCGA TGAATGGATC
GTGGAGCGCA CGGGCATCCG CGCACGCCAT TTCGCCGACC GGGACGTCAC CAGCAGCGAC
CTGGCGTTGG AAGCATCGCG CCGCGCGCTG GAGGCCGCCG GTTGCCAGGC GCAAGATCTT
GACCTGATCA TCGTTGCCAC GTCCACACCG GACATGGTGT TTCCCTCCAC CGCTTGCATT
CTGCAAAACA AGCTGGGTGC CAATGGCTGC CCCGCCTTCG ACGTGCAGGC CGTATGCAGC
GGCTTCGTCT ATGCACTCAC GGTGGCCGAC GCCATGATCC GCTCCGGAGG AGCGCGCCGT
GCGCTGGTCG TAGGGTCCGA GGTCTTCAGC CGCATTCTGG ATTTCAACGA CCGCACCACC
TGTGTGCTGT TCGGCGACGG CGCCGGCGCA GTGGTGCTGG AGGCCTCGGA AGCGCCCGGC
ATCCTTGCGA GCGACCTGCA TGCCGATGGC AGCCATGTTG GCATCCTCTG CGTGCCGGGC
AACGTCTACG GCGGCCAGAT TCTGGGCGAC CCTTTGCTCA AGATGGATGG CCAGGCCGTC
TTCAAGCTGG CCGTCGGCGT GCTGGAGAAA GCGGCGCGCG CCACGCTGGA CAAGGCGGGC
ATGACCGACG CCGATATCGA CTGGCTGATT CCCCACCAGG CCAACATTCG CATCATGCAG
AGCACGGCGC GTAAGCTGAA GCTGTCCATG GACAAGGTGG TGGTCACGGT GGATCAGCAC
GGCAATACGT CGGCCGCCTC CATTCCCTTG GCACTGGACC ATGGCGTGCG CAATGGCCAG
GTCCAGCCGG GCCAGACGGT GCTGCTGGAA GGGGTGGGCG GCGGCTTCAC CTGGGGTGCG
GTGCTCCTGA AAATGTAG
|
|---|
| Protein sequence | MTRYSRITGT GSYLPPHRVT NDDLVAQLAQ QGIETSDEWI VERTGIRARH FADRDVTSSD
LALEASRRAL EAAGCQAQDL DLIIVATSTP DMVFPSTACI LQNKLGANGC PAFDVQAVCS
GFVYALTVAD AMIRSGGARR ALVVGSEVFS RILDFNDRTT CVLFGDGAGA VVLEASEAPG
ILASDLHADG SHVGILCVPG NVYGGQILGD PLLKMDGQAV FKLAVGVLEK AARATLDKAG
MTDADIDWLI PHQANIRIMQ STARKLKLSM DKVVVTVDQH GNTSAASIPL ALDHGVRNGQ
VQPGQTVLLE GVGGGFTWGA VLLKM
|
|---|
| |