| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3219 |
|---|
| Symbol | |
|---|
| ID | 4671320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3402686 |
|---|
| End bp | 3403816 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639840259 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_987418 |
|---|
| Protein GI | 121595522 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA GAGATTTTTA CGAGGTCCTT GGCGTTCCCA AGAACGCCTC GGACGATGAG
ATCAAGAAAG CCTATCGCAA GCTCGCGATG AAGTACCACC CTGACCGCAA CCAGGGTGAT
GCTGCCAAGC CTGCCGAAGA GAAGTTCAAG GAGGCCAAGG AAGCCTACGA GATCCTGTCC
GACGCACAGA AACGCGCCGC CTACGACCAG TACGGCCACG CGGGCGTAGA CCCCAACATG
CGTGGCGGCA TGGGTGGCGC CGAGGGCTTT GGTGGCTTTG CCGAAGCCTT CGGAGACATC
TTCGGCGACA TGTTCGGCGG CGCGCGCGGG CGCGGCGGCC GGCAGGTGTA CCGCGGCAAC
GACCTCTCCT ACGCGATGGA AATCACGCTG GAGGAAGCCG CCAAGGGCAA GGAAGCGCAG
ATCCGCATTC CCAGTTGGGA AAGCTGCGAG ACCTGCCACG GCAGCGGCGC CAAACCCGGC
ACCAGCGCCA AGACCTGCGG CACCTGCCAG GGCTCTGGCA CGGTGCAGAT GCGCCAGGGT
TTCTTCAGCG TGCAGCAGAC CTGCCCCCAC TGCCGCGGCA CGGGCAAGAT CATTCCCGAG
CCCTGCACGG CCTGCCACGG CCAGGGCCGG GTCAAGAAAC AAAAGACGCT GGAGGTGAAG
ATCCCCGCCG GCATCGACGA CGGCATGCGC ATCCGCTCCA CCGGCAACGG GGAACCGGGC
ACCAATGGCG GGCCGCCGGG CGACCTGTAC ATCGAGATCC GCATCAAGAA GCACGACATC
TTCGAGCGCG ACGGCGACGA TCTGCACTGC CAGGTTCCGG TGAGCTTCAT CACCGCGGCG
CTGGGTGGAG AGATCGAGGT GCCCACGCTG CAGGGCAAGG CGGCCATCGA TATCCCCGAA
GGCACACAGG CCGGCAAACA GTTTCGCCTG AGGGGCAAGG GCATCAAGGG GGTGCGCTCC
AGCTACCCCG GCGATCTGTA CTGCCACATC ATCGTGGAAA CCCCGGTCAA GCTCACCGAG
CACCAGCGCA AGCTGCTCAA GGAACTGGAC GAGTCGCTCA AGAAGGGCGG TGCCAAGCAT
TCGCCGTCCA CCGAGAGCTG GACCGACCGG CTCAAGAGCT TCTTCAGCTG A
|
|---|
| Protein sequence | MSKRDFYEVL GVPKNASDDE IKKAYRKLAM KYHPDRNQGD AAKPAEEKFK EAKEAYEILS
DAQKRAAYDQ YGHAGVDPNM RGGMGGAEGF GGFAEAFGDI FGDMFGGARG RGGRQVYRGN
DLSYAMEITL EEAAKGKEAQ IRIPSWESCE TCHGSGAKPG TSAKTCGTCQ GSGTVQMRQG
FFSVQQTCPH CRGTGKIIPE PCTACHGQGR VKKQKTLEVK IPAGIDDGMR IRSTGNGEPG
TNGGPPGDLY IEIRIKKHDI FERDGDDLHC QVPVSFITAA LGGEIEVPTL QGKAAIDIPE
GTQAGKQFRL RGKGIKGVRS SYPGDLYCHI IVETPVKLTE HQRKLLKELD ESLKKGGAKH
SPSTESWTDR LKSFFS
|
|---|
| |