Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3163 |
Symbol | |
ID | 4673469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3344963 |
End bp | 3345463 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840205 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_987364 |
Protein GI | 121595468 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.878205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTGA CCCAGTGGAC CGACTACACG CTGCGCGTGC TCATGTACTG CGCCGCCTGC CAGGAGCGCG AGCAGCCCGT GACCATCAGC GAGGTGGCCG AGGCGCACGG CATCTCGCGC AGCCATCTCA CGAAGATCGT GCAGCAACTC GCGGCCCAGG GGCTGCTGGA CACCACGCGC GGGCGTGGTG GCGGCATGCG CCTGATGAAG CCGGCCAGCG AGATCAACCT GGGCCAGATC GTGCGCATGA CGGAGACCGA CTTCGATATG GTCGAGTGCT TCAATGCCGA GTTGAACCAA TGCCGCATGA GCAGCCACTG CCGTCTGCAA GCCGTGCTGT CCGACGCCAC GCGGGCCTAC CTTGCAGTGC TGGACAGCTT CACCGTGGCC GATCTGGTCA CCCCGTCCAT CGCTGCGCAG CGGCAGGGCG GGGCGGCGCT GGTGCAGTCC ATGCGCTGGG TGCCAGGGTT GCCCATCACC CGCCCCGAGA CATTGGCGTA A
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Protein sequence | MRLTQWTDYT LRVLMYCAAC QEREQPVTIS EVAEAHGISR SHLTKIVQQL AAQGLLDTTR GRGGGMRLMK PASEINLGQI VRMTETDFDM VECFNAELNQ CRMSSHCRLQ AVLSDATRAY LAVLDSFTVA DLVTPSIAAQ RQGGAALVQS MRWVPGLPIT RPETLA
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